Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW60_RS10710 | Genome accession | NZ_CP035987 |
| Coordinates | 2076265..2076549 (-) | Length | 94 a.a. |
| NCBI ID | WP_000843037.1 | Uniprot ID | A0A366FUU6 |
| Organism | Bacillus mycoides strain BPN29/1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2071265..2081549
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW60_RS10675 (EXW60_10885) | tmk | 2071419..2072045 (+) | 627 | WP_002009634.1 | dTMP kinase | - |
| EXW60_RS10680 (EXW60_10890) | holB | 2072081..2073064 (+) | 984 | WP_002009636.1 | DNA polymerase III subunit delta' | - |
| EXW60_RS10685 (EXW60_10895) | - | 2073070..2073897 (+) | 828 | WP_002009637.1 | stage 0 sporulation family protein | - |
| EXW60_RS10690 (EXW60_10900) | yabA | 2073912..2074262 (+) | 351 | WP_002009639.1 | DNA replication initiation control protein YabA | - |
| EXW60_RS10695 (EXW60_10905) | - | 2074383..2075123 (+) | 741 | WP_002130206.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| EXW60_RS10700 (EXW60_10910) | - | 2075110..2075400 (+) | 291 | WP_002130207.1 | GIY-YIG nuclease family protein | - |
| EXW60_RS10705 (EXW60_10915) | rsmI | 2075369..2076244 (+) | 876 | WP_002130208.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| EXW60_RS10710 (EXW60_10920) | abrB | 2076265..2076549 (-) | 285 | WP_000843037.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW60_RS10715 (EXW60_10925) | metG | 2077071..2079053 (+) | 1983 | WP_002029324.1 | methionine--tRNA ligase | - |
| EXW60_RS10720 (EXW60_10930) | - | 2079219..2079986 (+) | 768 | WP_002009645.1 | TatD family hydrolase | - |
| EXW60_RS10725 (EXW60_10935) | rnmV | 2080247..2080804 (+) | 558 | WP_002029323.1 | ribonuclease M5 | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10476.14 Da Isoelectric Point: 4.7174
>NTDB_id=345570 EXW60_RS10710 WP_000843037.1 2076265..2076549(-) (abrB) [Bacillus mycoides strain BPN29/1]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=345570 EXW60_RS10710 WP_000843037.1 2076265..2076549(-) (abrB) [Bacillus mycoides strain BPN29/1]
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTTGATGATGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGTAAAGAAGGCGCTGAA
CAAGTCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTTGATGATGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGTAAAGAAGGCGCTGAA
CAAGTCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
84.043 |
100 |
0.84 |