Detailed information NTG0345568

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: EXW60_RS10510
• Genome accession: NZ_CP035987
• Coordinates: 2038796..2039923 (+)
• Length: 375 a.a.
• NCBI ID: WP_002034987.1
• Uniprot ID: -
• Organism: Bacillus mycoides strain BPN29/1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2033796..2044923

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EXW60_RS10480 (EXW60_10690)	spoIIIJ	2033832..2034599 (-)	768	WP_002016477.1	YidC family membrane integrase SpoIIIJ	-
EXW60_RS10485 (EXW60_10695)	rnpA	2034652..2034999 (-)	348	WP_002089963.1	ribonuclease P protein component	-
EXW60_RS10490 (EXW60_10700)	rpmH	2035076..2035210 (-)	135	WP_002068706.1	50S ribosomal protein L34	-
EXW60_RS10495 (EXW60_10705)	dnaA	2035774..2037114 (+)	1341	WP_002016481.1	chromosomal replication initiator protein DnaA	-
EXW60_RS10500 (EXW60_10710)	dnaN	2037297..2038442 (+)	1146	WP_002034988.1	DNA polymerase III subunit beta	-
EXW60_RS10505 (EXW60_10715)	yaaA	2038571..2038783 (+)	213	WP_002016484.1	S4 domain-containing protein YaaA	-
EXW60_RS10510 (EXW60_10720)	recF	2038796..2039923 (+)	1128	WP_002034987.1	DNA replication/repair protein RecF	Machinery gene
EXW60_RS10515 (EXW60_10725)	gyrB	2039962..2041884 (+)	1923	WP_002034986.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
EXW60_RS10520 (EXW60_10730)	gyrA	2041973..2044444 (+)	2472	WP_002016488.1	DNA gyrase subunit A	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43514.79 Da
• Isoelectric Point: 6.8418

>NTDB_id=345568 EXW60_RS10510 WP_002034987.1 2038796..2039923(+) (recF) [Bacillus mycoides strain BPN29/1]
MFITEIQLKNYRNYEHLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDYGNIKGRLQRRNSS
ISLELNISKKGKKAKLNQLEQQKLSQYIGEMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGAKILRKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLLGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVEGIEHETLKEAKTIHVTNGTVDCEIDRK

Nucleotide

• Length: 1128 bp

>NTDB_id=345568 EXW60_RS10510 WP_002034987.1 2038796..2039923(+) (recF) [Bacillus mycoides strain BPN29/1]
TTGTTTATTACAGAAATACAATTAAAAAACTATCGCAATTATGAGCATTTAGAGCTTTCCTTTGAGGATAAAGTCAATGT
AATTATTGGTGAAAATGCGCAAGGGAAAACGAATCTGATGGAAGCTATTTATGTATTGGCGATGGCGAAATCTCATAGAA
CTTCGAACGATCGTGAACTCATTCGTTGGGATGAGGATTATGGTAATATAAAAGGTAGATTACAAAGGCGAAATAGTTCA
ATATCCTTAGAATTAAACATTTCAAAAAAAGGTAAAAAGGCAAAGTTAAATCAGTTAGAACAACAAAAATTGAGCCAGTA
TATTGGTGAAATGAATGTTGTTATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTACGAAGACGCT
TTTTGGATATGGAACTTGGACAAATAGCTCCGGTCTATTTGTATGAATTAAGTCAATATCAAAAGGTACTCACGCAACGA
AATCATTTACTTAAGAAGATGCAAGGGAATAGTAAAAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTTATTGA
GCATGGTGCAAAAATTTTGCGAAAACGTTTTGAGTTTTTGCATCTACTACAAGAATGGGCTGCTCCAATTCATCGCGGAA
TTAGCAGGGGATTAGAGGAGTTAGAAATCGTTTATAAACCAAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCTGTGAAACAACGTGAAATTTTTCGGGGTACAACTTTACTTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCACAAGGACAACAACGAACAACCGCACTAT
CCCTAAAATTAGCTGAAATTGAATTGATATACTCAGAGGTTAAGGAATATCCAATTCTTTTACTAGATGATGTGTTATCA
GAATTAGATGATTATCGTCAATCGCATCTGCTAAATACAATTCAAGGAAAAGTACAAACCTTTGTGACAACGACGAGTGT
CGAGGGAATTGAACACGAAACATTGAAAGAAGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGACA
GAAAATAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	67.12	98.133	0.659