Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   EXW37_RS05950 Genome accession   NZ_CP035978
Coordinates   1190797..1191480 (+) Length   227 a.a.
NCBI ID   WP_002011351.1    Uniprot ID   R8DDT2
Organism   Bacillus mycoides strain BPN121     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1185797..1196480
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW37_RS05930 (EXW37_06090) - 1186780..1188426 (+) 1647 WP_002134962.1 peptide ABC transporter substrate-binding protein -
  EXW37_RS05935 (EXW37_06095) - 1188456..1188659 (-) 204 WP_000559981.1 hypothetical protein -
  EXW37_RS05940 (EXW37_06105) spx 1189240..1189635 (+) 396 WP_002011348.1 transcriptional regulator Spx -
  EXW37_RS05945 (EXW37_06110) - 1189686..1190360 (-) 675 WP_061674935.1 TerC family protein -
  EXW37_RS05950 (EXW37_06115) mecA 1190797..1191480 (+) 684 WP_002011351.1 adaptor protein MecA Regulator
  EXW37_RS05955 (EXW37_06120) - 1191553..1193097 (+) 1545 WP_002064255.1 cardiolipin synthase -
  EXW37_RS05960 (EXW37_06125) - 1193189..1194424 (+) 1236 WP_215584689.1 competence protein CoiA family protein -
  EXW37_RS05965 (EXW37_06130) pepF 1194475..1196301 (+) 1827 WP_002140837.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 27029.17 Da        Isoelectric Point: 4.0116

>NTDB_id=345458 EXW37_RS05950 WP_002011351.1 1190797..1191480(+) (mecA) [Bacillus mycoides strain BPN121]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQVGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELH
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQVVKERALETIRNNFPPKM

Nucleotide


Download         Length: 684 bp        

>NTDB_id=345458 EXW37_RS05950 WP_002011351.1 1190797..1191480(+) (mecA) [Bacillus mycoides strain BPN121]
TTGGATATTGAAAGAATTAATGACCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGGTTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGATGATT
TCTTTATCGATGGGCCGTTATGGATCCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCGGAGCTT
TCAAAGGATGGACAAAAGCTGGAACTACCAATAGGTGTAGACAAAATTATAGACATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAGTAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTGATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAATTACAT
TCATTTGAGGACCGATATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATTGATCGTATTTTAAG
TATTGTTTTAGAATATGGAGAAGAATCTACTTTAACGATTCACCGTGTAAGTGAGTATGGGAAACAGGTTGTGAAAGAGC
GTGCACTTGAGACAATTCGCAACAATTTCCCTCCTAAAATGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB R8DDT2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

54.386

100

0.546


Multiple sequence alignment