Detailed information
Bioinformatically predicted
Overview
| Name | comX/sigX | Type | Regulator |
| Locus tag | SSUSC84_RS00420 | Genome accession | NC_012924 |
| Coordinates | 71440..71706 (+) | Length | 88 a.a. |
| NCBI ID | WP_014635810.1 | Uniprot ID | A0A2K1SXG9 |
| Organism | Streptococcus suis SC84 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 66440..76706
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SSUSC84_RS00385 (SSUSC84_0057) | cinA | 66446..67627 (+) | 1182 | WP_012774894.1 | competence/damage-inducible protein A | Machinery gene |
| SSUSC84_RS00390 (SSUSC84_0058) | recA | 67679..68830 (+) | 1152 | WP_011922545.1 | recombinase RecA | Machinery gene |
| SSUSC84_RS00395 (SSUSC84_0059) | spx | 69066..69464 (+) | 399 | WP_002939362.1 | transcriptional regulator Spx | - |
| SSUSC84_RS00400 (SSUSC84_0060) | - | 69564..69830 (+) | 267 | WP_002939360.1 | IreB family regulatory phosphoprotein | - |
| SSUSC84_RS00405 (SSUSC84_0061) | ruvX | 69830..70249 (+) | 420 | WP_002939356.1 | Holliday junction resolvase RuvX | - |
| SSUSC84_RS00410 (SSUSC84_0062) | - | 70261..70581 (+) | 321 | WP_002939343.1 | DUF1292 domain-containing protein | - |
| SSUSC84_RS00415 (SSUSC84_0063) | - | 70789..71367 (+) | 579 | WP_012774895.1 | nucleotidyltransferase family protein | - |
| SSUSC84_RS00420 (SSUSC84_0064) | comX/sigX | 71440..71706 (+) | 267 | WP_014635810.1 | hypothetical protein | Regulator |
| SSUSC84_RS00430 (SSUSC84_0065) | rpsJ | 72030..72338 (+) | 309 | WP_011922546.1 | 30S ribosomal protein S10 | - |
| SSUSC84_RS00435 (SSUSC84_0066) | rplC | 72435..73061 (+) | 627 | WP_011921686.1 | 50S ribosomal protein L3 | - |
| SSUSC84_RS00440 (SSUSC84_0067) | rplD | 73086..73709 (+) | 624 | WP_004195490.1 | 50S ribosomal protein L4 | - |
| SSUSC84_RS00445 (SSUSC84_0068) | - | 73709..74008 (+) | 300 | WP_004195491.1 | 50S ribosomal protein L23 | - |
| SSUSC84_RS00450 (SSUSC84_0069) | rplB | 74026..74859 (+) | 834 | WP_002936663.1 | 50S ribosomal protein L2 | - |
| SSUSC84_RS00455 (SSUSC84_0070) | rpsS | 75110..75391 (+) | 282 | WP_000533766.1 | 30S ribosomal protein S19 | - |
| SSUSC84_RS00460 (SSUSC84_0071) | rplV | 75409..75753 (+) | 345 | WP_002936662.1 | 50S ribosomal protein L22 | - |
| SSUSC84_RS00465 (SSUSC84_0072) | rpsC | 75766..76419 (+) | 654 | WP_002936661.1 | 30S ribosomal protein S3 | - |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 10670.50 Da Isoelectric Point: 9.1949
>NTDB_id=34543 SSUSC84_RS00420 WP_014635810.1 71440..71706(+) (comX/sigX) [Streptococcus suis SC84]
MEFETVCLKVRNLGRLYCYFKVKFRTHIEAIIRKQESQKCKFDRLLHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
MEFETVCLKVRNLGRLYCYFKVKFRTHIEAIIRKQESQKCKFDRLLHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
Nucleotide
Download Length: 267 bp
>NTDB_id=34543 SSUSC84_RS00420 WP_014635810.1 71440..71706(+) (comX/sigX) [Streptococcus suis SC84]
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAACCCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCCTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAACCCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCCTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX/sigX | Streptococcus suis D9 |
72.603 |
82.955 |
0.602 |
| comX/sigX | Streptococcus suis isolate S10 |
71.233 |
82.955 |
0.591 |
| comX/sigX | Streptococcus suis P1/7 |
71.233 |
82.955 |
0.591 |