Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   EXW31_RS19320 Genome accession   NZ_CP035974
Coordinates   3718894..3719352 (+) Length   152 a.a.
NCBI ID   WP_002160666.1    Uniprot ID   J8FDK7
Organism   Bacillus mycoides strain BPN102     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3713894..3724352
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW31_RS19305 (EXW31_19630) - 3714558..3714794 (+) 237 WP_002145984.1 hypothetical protein -
  EXW31_RS19310 (EXW31_19635) - 3714961..3717069 (-) 2109 WP_215597933.1 polyphosphate kinase -
  EXW31_RS19315 (EXW31_19640) - 3717178..3718752 (-) 1575 WP_131230653.1 Ppx/GppA family phosphatase -
  EXW31_RS19320 (EXW31_19645) kre 3718894..3719352 (+) 459 WP_002160666.1 YkyB family protein Regulator
  EXW31_RS19325 (EXW31_19650) - 3719384..3720046 (-) 663 WP_002066948.1 YkyA family protein -
  EXW31_RS19330 (EXW31_19655) - 3720600..3721253 (-) 654 WP_088079297.1 diguanylate cyclase domain-containing protein -
  EXW31_RS19335 (EXW31_19660) - 3721418..3721651 (+) 234 WP_002160664.1 phage holin -
  EXW31_RS19340 (EXW31_19665) - 3721683..3722183 (-) 501 WP_002160663.1 hypothetical protein -
  EXW31_RS19345 (EXW31_19670) - 3722645..3724186 (+) 1542 WP_002145976.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17785.46 Da        Isoelectric Point: 10.6793

>NTDB_id=345421 EXW31_RS19320 WP_002160666.1 3718894..3719352(+) (kre) [Bacillus mycoides strain BPN102]
MKPSQPQSQLHNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKDDFRTLPHLGHLESSYRNPKTTLSLTIAKKTLQDYIGPEALKQEKKLNEAVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=345421 EXW31_RS19320 WP_002160666.1 3718894..3719352(+) (kre) [Bacillus mycoides strain BPN102]
ATGAAACCTTCACAACCCCAATCTCAATTACATAATCAACATTCTATTAATAGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAACCCTAAGTACTTATATTGGTTAAAAAAGACTGCTTTAGAACGCTTAATTACTGAAA
AAAAGGCTATCAAAGAAGGATTACATTTTTCTAGAAATCCACGTTTTAGTCAACAACAATCCGATGTTCTTATACGTTTA
GGTGATTATTTTTTCCATATCCCTCCTACGAAAGATGATTTTCGCACCCTACCGCATCTTGGTCACCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAATAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTAAAAC
AAGAAAAAAAATTAAACGAAGCAGTTCCATGGTATAGCCGTACCTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB J8FDK7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

57.746

93.421

0.539

Multiple sequence alignment