Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   EXW35_RS20775 Genome accession   NZ_CP035965
Coordinates   4078615..4079409 (-) Length   264 a.a.
NCBI ID   WP_002015081.1    Uniprot ID   R8I3Q7
Organism   Bacillus mycoides strain BPN09/1     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4073615..4084409
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW35_RS20730 (EXW35_21170) - 4074039..4074185 (+) 147 WP_001247671.1 YycC family protein -
  EXW35_RS20735 (EXW35_21175) - 4074426..4074989 (-) 564 WP_002129034.1 PRK06770 family protein -
  EXW35_RS31570 - 4075287..4075385 (-) 99 Protein_4071 sporulation initiation factor Spo0A C-terminal domain-containing protein -
  EXW35_RS20745 (EXW35_21185) - 4075624..4075899 (-) 276 WP_002129035.1 hypothetical protein -
  EXW35_RS20750 (EXW35_21190) - 4075940..4076545 (-) 606 WP_078213457.1 hypothetical protein -
  EXW35_RS20755 - 4076529..4076684 (-) 156 WP_002129038.1 hypothetical protein -
  EXW35_RS20760 (EXW35_21195) - 4076721..4077293 (-) 573 WP_002138281.1 DUF1629 domain-containing protein -
  EXW35_RS20765 (EXW35_21200) - 4077371..4077835 (-) 465 Protein_4076 T7SS effector LXG polymorphic toxin -
  EXW35_RS20770 (EXW35_21205) - 4078092..4078409 (-) 318 WP_233151937.1 integrase -
  EXW35_RS20775 (EXW35_21210) spo0A 4078615..4079409 (-) 795 WP_002015081.1 sporulation transcription factor Spo0A Regulator
  EXW35_RS20780 (EXW35_21220) spoIVB 4079696..4080988 (-) 1293 WP_078213459.1 SpoIVB peptidase -
  EXW35_RS20785 (EXW35_21225) recN 4081108..4082847 (-) 1740 WP_002088564.1 DNA repair protein RecN Machinery gene
  EXW35_RS20790 (EXW35_21230) argR 4083118..4083567 (-) 450 WP_002015076.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29525.32 Da        Isoelectric Point: 7.1180

>NTDB_id=345376 EXW35_RS20775 WP_002015081.1 4078615..4079409(-) (spo0A) [Bacillus mycoides strain BPN09/1]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGIAYNGQECLNLLKEKQPDILVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKESATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=345376 EXW35_RS20775 WP_002015081.1 4078615..4079409(-) (spo0A) [Bacillus mycoides strain BPN09/1]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTGGTATCGATGCTAGAGAGTTATGTTGCTGCCCAAGA
TGATATGGAAGTTATCGGAATTGCTTACAATGGTCAAGAATGTTTAAACTTATTGAAAGAAAAGCAGCCTGATATACTCG
TTTTAGACATTATTATGCCACATTTAGATGGTCTAGCTGTGCTAGAGAAAATGCGACATATTGAAAGGTTAAGACAACCT
AGCGTTATTATGTTGACAGCATTCGGACAAGAAGATGTGACGAAAAAAGCGGTTGATTTAGGGGCATCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACAAGTCATATTCGTCAAGTTAGTGGTAAGGAAAGTGCTACTATTAAACGTCCAT
TACCATCTTTCCGATCAGCAACAACGATCGATGGAAAACCGAAAAACTTAGATGCGAGTATTACAAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGGTACATGTACTTACGAGAAGCAATCTCTATGGTGTACAATGATATCGAATTACT
AGGATCTATTACGAAAGTATTATATCCAGATATTGCAAAGAAATATAATACAACAGCAAGCCGTGTCGAGCGCGCAATCC
GTCACGCAATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTTGGTTATACTGTATCCATGTCA
AAAGCAAAACCTACGAATTCCGAGTTCATCGCAATGGTTGCGGATAAGCTAAGACTTGAACATAAGGCTTCGTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB R8I3Q7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment