Detailed information
Bioinformatically predicted
Overview
| Name | pilL | Type | Machinery gene |
| Locus tag | GHB96_RS02325 | Genome accession | NZ_CP045707 |
| Coordinates | 450168..450641 (+) | Length | 157 a.a. |
| NCBI ID | WP_215772556.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain NG250 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 445168..455641
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GHB96_RS02300 (GHB96_02420) | dnaB | 445640..447046 (+) | 1407 | WP_215772538.1 | replicative DNA helicase | - |
| GHB96_RS02305 (GHB96_02425) | pilH | 447354..448016 (+) | 663 | WP_215772539.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| GHB96_RS02310 (GHB96_02430) | pilV/pilI | 448048..448656 (+) | 609 | WP_215772540.1 | type IV pilus modification protein PilV | Regulator |
| GHB96_RS02315 (GHB96_02435) | pilJ | 448653..449588 (+) | 936 | WP_215772541.1 | PilW family protein | Machinery gene |
| GHB96_RS02320 (GHB96_02440) | pilK | 449567..450166 (+) | 600 | WP_050157381.1 | pilus assembly protein | Machinery gene |
| GHB96_RS02325 (GHB96_02445) | pilL | 450168..450641 (+) | 474 | WP_215772556.1 | PilX family type IV pilin | Machinery gene |
| GHB96_RS02330 (GHB96_02450) | - | 450711..451019 (-) | 309 | WP_025456241.1 | AzlD family protein | - |
| GHB96_RS02335 (GHB96_02455) | - | 451016..451727 (-) | 712 | Protein_459 | AzlC family ABC transporter permease | - |
| GHB96_RS02340 (GHB96_02460) | dut | 451893..452345 (+) | 453 | WP_003687923.1 | dUTP diphosphatase | - |
| GHB96_RS02345 (GHB96_02465) | dapC | 452423..453610 (+) | 1188 | WP_003687924.1 | succinyldiaminopimelate transaminase | - |
| GHB96_RS02350 (GHB96_02470) | yaaA | 453921..454700 (+) | 780 | WP_003687925.1 | peroxide stress protein YaaA | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 17473.22 Da Isoelectric Point: 9.8579
>NTDB_id=345374 GHB96_RS02325 WP_215772556.1 450168..450641(+) (pilL) [Neisseria gonorrhoeae strain NG250]
MEQKGFTLIEMMIVVTILGIISVIAIPSYQSYIEKGYQSQLYTEMVGINNVLKRFILKNPQDDNDILKSKLGIFVSGYKM
NPKIAKKYSVSVQFVNEGKPRAYRLVGVPNAGTGYTLSVWMNSVGDGYKCRNATSAQTYSETLSANTGCEAFSNRKK
MEQKGFTLIEMMIVVTILGIISVIAIPSYQSYIEKGYQSQLYTEMVGINNVLKRFILKNPQDDNDILKSKLGIFVSGYKM
NPKIAKKYSVSVQFVNEGKPRAYRLVGVPNAGTGYTLSVWMNSVGDGYKCRNATSAQTYSETLSANTGCEAFSNRKK
Nucleotide
Download Length: 474 bp
>NTDB_id=345374 GHB96_RS02325 WP_215772556.1 450168..450641(+) (pilL) [Neisseria gonorrhoeae strain NG250]
ATGGAACAAAAAGGGTTTACATTGATTGAGATGATGATAGTTGTCACGATACTCGGCATTATCAGCGTCATTGCCATACC
TTCTTATCAGAGTTATATTGAAAAAGGCTATCAGTCCCAGCTTTATACGGAGATGGTCGGTATCAACAATGTTCTCAAAC
GGTTTATTTTGAAAAATCCCCAGGACGATAATGATATCCTCAAGAGCAAACTGGGAATATTTGTCTCAGGCTATAAGATG
AATCCGAAAATTGCCAAAAAATATAGTGTTTCGGTGCAGTTTGTCAATGAGGGAAAACCAAGGGCATACAGGTTGGTCGG
TGTTCCGAACGCGGGGACGGGTTATACCTTGTCGGTATGGATGAACAGCGTGGGCGACGGATACAAATGCCGTAATGCCA
CTTCTGCCCAGACCTATTCGGAGACCTTGTCCGCAAATACCGGCTGTGAAGCTTTCTCTAATCGTAAAAAATAG
ATGGAACAAAAAGGGTTTACATTGATTGAGATGATGATAGTTGTCACGATACTCGGCATTATCAGCGTCATTGCCATACC
TTCTTATCAGAGTTATATTGAAAAAGGCTATCAGTCCCAGCTTTATACGGAGATGGTCGGTATCAACAATGTTCTCAAAC
GGTTTATTTTGAAAAATCCCCAGGACGATAATGATATCCTCAAGAGCAAACTGGGAATATTTGTCTCAGGCTATAAGATG
AATCCGAAAATTGCCAAAAAATATAGTGTTTCGGTGCAGTTTGTCAATGAGGGAAAACCAAGGGCATACAGGTTGGTCGG
TGTTCCGAACGCGGGGACGGGTTATACCTTGTCGGTATGGATGAACAGCGTGGGCGACGGATACAAATGCCGTAATGCCA
CTTCTGCCCAGACCTATTCGGAGACCTTGTCCGCAAATACCGGCTGTGAAGCTTTCTCTAATCGTAAAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilL | Neisseria gonorrhoeae MS11 |
93.631 |
100 |
0.936 |
| pilX | Neisseria meningitidis 8013 |
82.803 |
100 |
0.828 |