Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW35_RS09685 | Genome accession | NZ_CP035965 |
| Coordinates | 1902107..1902394 (+) | Length | 95 a.a. |
| NCBI ID | WP_002012401.1 | Uniprot ID | A0A366G1Y4 |
| Organism | Bacillus mycoides strain BPN09/1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1897107..1907394
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW35_RS09665 (EXW35_09860) | - | 1898297..1898484 (+) | 188 | Protein_1833 | DUF4083 domain-containing protein | - |
| EXW35_RS09670 (EXW35_09865) | - | 1898512..1898973 (+) | 462 | WP_002130989.1 | NUDIX hydrolase | - |
| EXW35_RS09675 (EXW35_09870) | nadE | 1899018..1899836 (-) | 819 | WP_002012398.1 | ammonia-dependent NAD(+) synthetase | - |
| EXW35_RS09680 (EXW35_09875) | - | 1900107..1901987 (+) | 1881 | WP_002012400.1 | ABC transporter permease | - |
| EXW35_RS09685 (EXW35_09880) | abrB | 1902107..1902394 (+) | 288 | WP_002012401.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW35_RS09690 (EXW35_09885) | - | 1902725..1903675 (+) | 951 | WP_215550943.1 | serine protease | - |
| EXW35_RS09695 (EXW35_09890) | - | 1903716..1904024 (-) | 309 | WP_002012403.1 | helix-turn-helix transcriptional regulator | - |
| EXW35_RS09700 (EXW35_09895) | - | 1904132..1905067 (+) | 936 | WP_003188755.1 | aldo/keto reductase | - |
| EXW35_RS09705 (EXW35_09900) | - | 1905117..1905320 (+) | 204 | WP_002012406.1 | hypothetical protein | - |
| EXW35_RS09710 (EXW35_09905) | - | 1905351..1905575 (-) | 225 | WP_002012407.1 | hypothetical protein | - |
| EXW35_RS09715 (EXW35_09910) | - | 1905660..1906007 (-) | 348 | WP_000426320.1 | DUF4257 domain-containing protein | - |
| EXW35_RS09720 (EXW35_09915) | - | 1906204..1906730 (+) | 527 | Protein_1844 | DinB family protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10647.42 Da Isoelectric Point: 6.9795
>NTDB_id=345365 EXW35_RS09685 WP_002012401.1 1902107..1902394(+) (abrB) [Bacillus mycoides strain BPN09/1]
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
Nucleotide
Download Length: 288 bp
>NTDB_id=345365 EXW35_RS09685 WP_002012401.1 1902107..1902394(+) (abrB) [Bacillus mycoides strain BPN09/1]
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGTATAGTTATTCCTAAAGAATTACGGGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCATACAATGCTT
GTCAAATAACAGGTGATGTTTCAGATCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGTATAGTTATTCCTAAAGAATTACGGGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCATACAATGCTT
GTCAAATAACAGGTGATGTTTCAGATCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.383 |
98.947 |
0.558 |