Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | EXW30_RS06255 | Genome accession | NZ_CP035962 |
| Coordinates | 1210332..1210655 (-) | Length | 107 a.a. |
| NCBI ID | WP_002064339.1 | Uniprot ID | J8AHG1 |
| Organism | Bacillus mycoides strain BPN07/3 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1205332..1215655
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW30_RS06230 (EXW30_06365) | - | 1205559..1206845 (+) | 1287 | WP_131229802.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| EXW30_RS06235 (EXW30_06370) | sipW | 1207046..1207615 (+) | 570 | WP_016104223.1 | signal peptidase I SipW | - |
| EXW30_RS06240 (EXW30_06375) | - | 1207677..1208264 (+) | 588 | WP_002158775.1 | CalY family protein | - |
| EXW30_RS06245 (EXW30_06380) | - | 1208400..1209269 (+) | 870 | WP_131229804.1 | DUF4047 domain-containing protein | - |
| EXW30_RS06250 (EXW30_06385) | calY | 1209657..1210250 (+) | 594 | WP_088078056.1 | biofilm matrix protein CalY | - |
| EXW30_RS06255 (EXW30_06390) | sinR | 1210332..1210655 (-) | 324 | WP_002064339.1 | helix-turn-helix domain-containing protein | Regulator |
| EXW30_RS06260 (EXW30_06395) | - | 1210735..1210869 (-) | 135 | WP_002011474.1 | anti-repressor SinI family protein | - |
| EXW30_RS06265 (EXW30_06400) | inhA1 | 1211211..1213598 (+) | 2388 | WP_131229806.1 | M6 family metalloprotease immune inhibitor InhA1 | - |
| EXW30_RS06270 (EXW30_06405) | - | 1213770..1215137 (+) | 1368 | WP_131229808.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12320.06 Da Isoelectric Point: 7.2050
>NTDB_id=345312 EXW30_RS06255 WP_002064339.1 1210332..1210655(-) (sinR) [Bacillus mycoides strain BPN07/3]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKISAVLQIPVDTLLHDETTTESHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTQWKKNQQ
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKISAVLQIPVDTLLHDETTTESHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTQWKKNQQ
Nucleotide
Download Length: 324 bp
>NTDB_id=345312 EXW30_RS06255 WP_002064339.1 1210332..1210655(-) (sinR) [Bacillus mycoides strain BPN07/3]
ATGATAGGAGAACGTATAAAACGCCTTCGTTTACAAAAGGGCATTTCACTAACAGAACTCGCCGAAAAAGCTGGTGTAGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAAAACCCTTCCATTCAGTTTCTCGAAAAAATTTCAGCTGTTC
TACAAATTCCAGTTGATACGTTACTTCACGATGAAACAACAACAGAAAGTCATCTAGACTCCGAATGGACACAACTCGTT
AAAGATGCGATGAGCTCCGGTGTCTCAAAAGAACAGTTTCGTGAATTTCTTGAATTTACACAATGGAAGAAAAATCAACA
ATAA
ATGATAGGAGAACGTATAAAACGCCTTCGTTTACAAAAGGGCATTTCACTAACAGAACTCGCCGAAAAAGCTGGTGTAGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAAAACCCTTCCATTCAGTTTCTCGAAAAAATTTCAGCTGTTC
TACAAATTCCAGTTGATACGTTACTTCACGATGAAACAACAACAGAAAGTCATCTAGACTCCGAATGGACACAACTCGTT
AAAGATGCGATGAGCTCCGGTGTCTCAAAAGAACAGTTTCGTGAATTTCTTGAATTTACACAATGGAAGAAAAATCAACA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
67.89 |
100 |
0.692 |