Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   EXW30_RS05800 Genome accession   NZ_CP035962
Coordinates   1123076..1123252 (+) Length   58 a.a.
NCBI ID   WP_002011319.1    Uniprot ID   A0A366GET8
Organism   Bacillus mycoides strain BPN07/3     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1118076..1128252
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW30_RS05780 (EXW30_05900) clpB 1118404..1121004 (+) 2601 WP_215569995.1 ATP-dependent chaperone ClpB -
  EXW30_RS05785 (EXW30_05905) - 1121036..1121218 (-) 183 WP_001211111.1 YjzD family protein -
  EXW30_RS05790 (EXW30_05910) - 1121375..1122109 (+) 735 WP_002149846.1 hypothetical protein -
  EXW30_RS05795 (EXW30_05915) - 1122139..1123011 (+) 873 WP_002158895.1 NAD-dependent epimerase/dehydratase family protein -
  EXW30_RS05800 (EXW30_05920) comZ 1123076..1123252 (+) 177 WP_002011319.1 ComZ family protein Regulator
  EXW30_RS05805 (EXW30_05925) fabH 1123832..1124764 (+) 933 WP_002149840.1 beta-ketoacyl-ACP synthase III -
  EXW30_RS05810 (EXW30_05930) fabF 1124796..1126034 (+) 1239 WP_215569996.1 beta-ketoacyl-ACP synthase II -
  EXW30_RS05815 (EXW30_05935) - 1126151..1126942 (+) 792 WP_215569998.1 DUF2268 domain-containing protein -
  EXW30_RS05820 (EXW30_05940) - 1127086..1127832 (+) 747 WP_002158893.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6491.67 Da        Isoelectric Point: 4.6653

>NTDB_id=345307 EXW30_RS05800 WP_002011319.1 1123076..1123252(+) (comZ) [Bacillus mycoides strain BPN07/3]
MNEKSMQFLQIAMKHLPEAKAILDSNGIALDMEKAQPVLELLMKVMGEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=345307 EXW30_RS05800 WP_002011319.1 1123076..1123252(+) (comZ) [Bacillus mycoides strain BPN07/3]
ATGAACGAAAAAAGTATGCAATTTTTACAAATCGCAATGAAACATTTACCAGAAGCTAAGGCAATTTTAGATTCTAATGG
AATTGCGCTTGATATGGAGAAAGCACAGCCGGTGTTAGAGCTATTGATGAAAGTAATGGGCGAAGCATATGAGCTTGGGA
AAGCGGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A366GET8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment