Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | GFM36_RS06960 | Genome accession | NZ_CP045645 |
| Coordinates | 1446742..1449321 (+) | Length | 859 a.a. |
| NCBI ID | WP_001210050.1 | Uniprot ID | V5VGK1 |
| Organism | Acinetobacter baumannii strain XH1056 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1441742..1454321
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GFM36_RS06930 (GFM36_06950) | - | 1442342..1443391 (-) | 1050 | WP_001159800.1 | NADP(H)-dependent aldo-keto reductase | - |
| GFM36_RS06935 (GFM36_06955) | crp | 1443552..1444259 (-) | 708 | WP_000203217.1 | cAMP-activated global transcriptional regulator CRP | Regulator |
| GFM36_RS06940 | - | 1444500..1444619 (+) | 120 | Protein_1341 | hypothetical protein | - |
| GFM36_RS06945 (GFM36_06960) | - | 1444698..1445120 (+) | 423 | WP_001195082.1 | OsmC family protein | - |
| GFM36_RS06950 (GFM36_06965) | - | 1445213..1445638 (+) | 426 | WP_001026231.1 | GNAT family N-acetyltransferase | - |
| GFM36_RS06955 (GFM36_06970) | - | 1445635..1446441 (-) | 807 | WP_001237343.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| GFM36_RS06960 (GFM36_06975) | clpC | 1446742..1449321 (+) | 2580 | WP_001210050.1 | ATP-dependent chaperone ClpB | Regulator |
| GFM36_RS06965 (GFM36_06980) | - | 1449378..1449866 (-) | 489 | WP_000941313.1 | CinA family protein | - |
| GFM36_RS06970 (GFM36_06985) | - | 1450135..1450551 (+) | 417 | WP_001060738.1 | hypothetical protein | - |
| GFM36_RS06975 (GFM36_06990) | rlmKL | 1450577..1452781 (-) | 2205 | WP_001098019.1 | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | - |
| GFM36_RS06980 (GFM36_06995) | - | 1453020..1453364 (+) | 345 | WP_000654268.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 859 a.a. Molecular weight: 95142.36 Da Isoelectric Point: 4.9733
>NTDB_id=345305 GFM36_RS06960 WP_001210050.1 1446742..1449321(+) (clpC) [Acinetobacter baumannii strain XH1056]
MRFEKFTNRLQQALSDAQSLAMGKDHTAIAGIHILSTLLEEPSNISLLQQAGARLPELKQKLEQALKDAPTIANPTGDVN
LNPEAVKALNLADRYAQKAGDEFLSTDWVLLGLAETGETKNILSAVGVTPDSLRKVIENIRGSDKVMSNNHEDQRDSLNK
YTIDLTERALSGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLG
SLLAGAKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYI
EKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKM
EIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKAEVTHLEKQIAEVEKEYNDLEEVWKAEKTLVEGTKQAQVELDKAR
IAFEKAQREGDLAEAARLQYGVIPELQKQLEQDEVAEENEEPKLIRTKVTENEIAEVVSAATGIPVAKMMQGEREKLLHM
EEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHS
VSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGS
QDVRELGEGATDDEVRTIVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMSLTVDDSAFDL
LIDAGFDPVYGARPLKRAIQQQVENTLAQKILSGDFVAGDTILVKGENGHLVFDKLKLS
MRFEKFTNRLQQALSDAQSLAMGKDHTAIAGIHILSTLLEEPSNISLLQQAGARLPELKQKLEQALKDAPTIANPTGDVN
LNPEAVKALNLADRYAQKAGDEFLSTDWVLLGLAETGETKNILSAVGVTPDSLRKVIENIRGSDKVMSNNHEDQRDSLNK
YTIDLTERALSGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLG
SLLAGAKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYI
EKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKM
EIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKAEVTHLEKQIAEVEKEYNDLEEVWKAEKTLVEGTKQAQVELDKAR
IAFEKAQREGDLAEAARLQYGVIPELQKQLEQDEVAEENEEPKLIRTKVTENEIAEVVSAATGIPVAKMMQGEREKLLHM
EEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHS
VSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGS
QDVRELGEGATDDEVRTIVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMSLTVDDSAFDL
LIDAGFDPVYGARPLKRAIQQQVENTLAQKILSGDFVAGDTILVKGENGHLVFDKLKLS
Nucleotide
Download Length: 2580 bp
>NTDB_id=345305 GFM36_RS06960 WP_001210050.1 1446742..1449321(+) (clpC) [Acinetobacter baumannii strain XH1056]
ATGCGATTTGAAAAATTTACGAACCGCTTGCAGCAAGCCCTCTCAGATGCTCAATCCTTAGCGATGGGTAAAGACCATAC
AGCTATAGCAGGTATTCATATTTTGAGTACTTTATTGGAAGAGCCGTCCAATATTAGTTTGTTGCAACAAGCAGGTGCAC
GGTTACCTGAACTTAAACAAAAGCTAGAGCAGGCTTTAAAAGATGCTCCGACTATTGCTAACCCGACGGGCGATGTCAAT
TTAAACCCAGAAGCAGTTAAAGCACTCAACTTGGCAGATCGATACGCGCAAAAAGCTGGCGATGAATTTTTGTCAACTGA
CTGGGTTTTATTGGGCTTGGCAGAAACTGGTGAAACAAAAAATATTTTAAGTGCCGTAGGTGTAACTCCCGACAGCTTAC
GCAAAGTAATTGAAAATATTCGAGGTAGTGACAAAGTCATGAGTAATAATCACGAAGACCAACGTGACTCACTTAATAAA
TATACGATTGATTTAACCGAGCGGGCTTTATCGGGGAAACTTGATCCGGTGATTGGGCGTGATGATGAGATCCGTCGTAC
CATTCAGGTCTTGTCACGCCGTACTAAAAATAACCCAGTACTCATTGGTGAACCTGGGGTAGGTAAAACCGCTATTGTTG
AAGGTTTGGCACAACGTATTGTCAATGGTGAAGTACCAGAAGGCTTAAAGAATAAACGTGTTTTATCGTTAGATTTAGGT
TCATTGCTTGCAGGTGCTAAGTATCGTGGTGAGTTTGAAGAACGTTTAAAAGCTGTTTTAAAAGATTTGGCGAAACACGA
AGGCGAAATCATCTTATTCATTGACGAGTTACACACACTCGTTGGTGCTGGTAAAGGTGATGGTGCGATGGATGCAGGTA
ATATGTTAAAACCTGCGTTGGCTCGTGGTGAGTTGCGCTGTGTGGGTGCAACAACCTTAGATGAATATCGCCAATATATT
GAAAAAGATGCAGCCTTGGAGCGTCGTTTCCAAAAAGTGCTGGTCGATGAACCAAGTGTAGAAGATACCATTGCGATTTT
ACGTGGTCTGAAAGAAAAGTATGCGACTCACCATGGCGTACAGATTTTAGATTCAGCGATTATTGCTGCGGCGAAAATGT
CTCATCGTTATATTACAGATCGTCAATTACCGGACAAGGCGATTGACCTGATTGATGAGGCCGCTTCTCGTATTAAGATG
GAAATCGATTCTAAGCCAGAAGCACTTGATAAACTTGATCGCCGTTTAATCCAGTTGAAAATGCAATTGGAAGCGGTGAA
AAAAGATGAAGACGCAGGCAGTAAGGCCGAAGTTACTCATCTTGAAAAACAGATCGCTGAAGTCGAGAAAGAATACAACG
ATCTGGAAGAAGTGTGGAAAGCTGAGAAAACACTGGTAGAAGGCACTAAACAAGCTCAGGTTGAACTTGATAAAGCACGT
ATTGCTTTTGAAAAAGCTCAGCGTGAAGGCGATTTGGCAGAAGCAGCACGTTTGCAATATGGTGTAATTCCAGAGTTGCA
AAAACAACTTGAACAAGATGAAGTTGCTGAAGAAAACGAAGAGCCAAAACTCATTCGTACAAAAGTAACTGAAAATGAAA
TTGCTGAAGTCGTTAGTGCTGCAACAGGTATTCCGGTTGCTAAAATGATGCAAGGCGAGCGTGAAAAACTCCTTCATATG
GAAGAGTTTTTACATGACCGTGTTGTAGGGCAAGATGAAGCAGTTGTTGCGGTATCGAATGCTGTTCGCCGTTCACGTGC
CGGTTTGTCTGACCCGAATCGTCCTAGCGGATCATTCTTGTTCTTAGGACCAACGGGTGTTGGTAAAACTGAGTTGACTA
AAGCTTTAGCTAACTTCTTGTTTGACAGTGATGATGCCATGATTCGTATCGATATGAGTGAATTCATGGAGAAACATTCT
GTCAGCCGTTTAGTTGGTGCGCCTCCGGGTTACGTAGGTTACGAAGAGGGCGGTGTTTTAACCGAAGCTGTTCGCCGTAA
ACCATATAGCGTAGTGTTGTTTGATGAGGTTGAAAAAGCGCATCCAGATGTCTTCAATATCTTGCTACAAGTGTTAGACG
ATGGACGCTTAACCGACTCACAAGGTCGTGTAGTGGACTTTAAAAACACGGTTATTGTGATGACATCGAACTTGGGTTCA
CAAGATGTACGTGAACTTGGTGAAGGTGCAACTGATGATGAAGTGCGTACTATTGTAATGAATGCGGTAAGTCAGCATTT
CCGTCCGGAGTTTATTAACCGGATTGATGAGCTGGTGATTTTCCATTCACTCAAAAAAGCACAGATTCGTGGCATTGCCG
ATATTCAGTTAGATCGCTTACGCTCACGACTTGTTGATCGTGATATGAGTTTAACTGTAGATGACAGTGCATTTGACTTA
TTGATTGACGCTGGTTTTGATCCTGTATATGGAGCGCGTCCATTGAAACGTGCAATTCAACAACAGGTTGAAAATACACT
AGCTCAAAAAATCTTGTCAGGTGACTTTGTTGCGGGTGATACCATTTTAGTTAAAGGCGAAAATGGTCACTTAGTGTTTG
ATAAGTTGAAACTCAGCTAA
ATGCGATTTGAAAAATTTACGAACCGCTTGCAGCAAGCCCTCTCAGATGCTCAATCCTTAGCGATGGGTAAAGACCATAC
AGCTATAGCAGGTATTCATATTTTGAGTACTTTATTGGAAGAGCCGTCCAATATTAGTTTGTTGCAACAAGCAGGTGCAC
GGTTACCTGAACTTAAACAAAAGCTAGAGCAGGCTTTAAAAGATGCTCCGACTATTGCTAACCCGACGGGCGATGTCAAT
TTAAACCCAGAAGCAGTTAAAGCACTCAACTTGGCAGATCGATACGCGCAAAAAGCTGGCGATGAATTTTTGTCAACTGA
CTGGGTTTTATTGGGCTTGGCAGAAACTGGTGAAACAAAAAATATTTTAAGTGCCGTAGGTGTAACTCCCGACAGCTTAC
GCAAAGTAATTGAAAATATTCGAGGTAGTGACAAAGTCATGAGTAATAATCACGAAGACCAACGTGACTCACTTAATAAA
TATACGATTGATTTAACCGAGCGGGCTTTATCGGGGAAACTTGATCCGGTGATTGGGCGTGATGATGAGATCCGTCGTAC
CATTCAGGTCTTGTCACGCCGTACTAAAAATAACCCAGTACTCATTGGTGAACCTGGGGTAGGTAAAACCGCTATTGTTG
AAGGTTTGGCACAACGTATTGTCAATGGTGAAGTACCAGAAGGCTTAAAGAATAAACGTGTTTTATCGTTAGATTTAGGT
TCATTGCTTGCAGGTGCTAAGTATCGTGGTGAGTTTGAAGAACGTTTAAAAGCTGTTTTAAAAGATTTGGCGAAACACGA
AGGCGAAATCATCTTATTCATTGACGAGTTACACACACTCGTTGGTGCTGGTAAAGGTGATGGTGCGATGGATGCAGGTA
ATATGTTAAAACCTGCGTTGGCTCGTGGTGAGTTGCGCTGTGTGGGTGCAACAACCTTAGATGAATATCGCCAATATATT
GAAAAAGATGCAGCCTTGGAGCGTCGTTTCCAAAAAGTGCTGGTCGATGAACCAAGTGTAGAAGATACCATTGCGATTTT
ACGTGGTCTGAAAGAAAAGTATGCGACTCACCATGGCGTACAGATTTTAGATTCAGCGATTATTGCTGCGGCGAAAATGT
CTCATCGTTATATTACAGATCGTCAATTACCGGACAAGGCGATTGACCTGATTGATGAGGCCGCTTCTCGTATTAAGATG
GAAATCGATTCTAAGCCAGAAGCACTTGATAAACTTGATCGCCGTTTAATCCAGTTGAAAATGCAATTGGAAGCGGTGAA
AAAAGATGAAGACGCAGGCAGTAAGGCCGAAGTTACTCATCTTGAAAAACAGATCGCTGAAGTCGAGAAAGAATACAACG
ATCTGGAAGAAGTGTGGAAAGCTGAGAAAACACTGGTAGAAGGCACTAAACAAGCTCAGGTTGAACTTGATAAAGCACGT
ATTGCTTTTGAAAAAGCTCAGCGTGAAGGCGATTTGGCAGAAGCAGCACGTTTGCAATATGGTGTAATTCCAGAGTTGCA
AAAACAACTTGAACAAGATGAAGTTGCTGAAGAAAACGAAGAGCCAAAACTCATTCGTACAAAAGTAACTGAAAATGAAA
TTGCTGAAGTCGTTAGTGCTGCAACAGGTATTCCGGTTGCTAAAATGATGCAAGGCGAGCGTGAAAAACTCCTTCATATG
GAAGAGTTTTTACATGACCGTGTTGTAGGGCAAGATGAAGCAGTTGTTGCGGTATCGAATGCTGTTCGCCGTTCACGTGC
CGGTTTGTCTGACCCGAATCGTCCTAGCGGATCATTCTTGTTCTTAGGACCAACGGGTGTTGGTAAAACTGAGTTGACTA
AAGCTTTAGCTAACTTCTTGTTTGACAGTGATGATGCCATGATTCGTATCGATATGAGTGAATTCATGGAGAAACATTCT
GTCAGCCGTTTAGTTGGTGCGCCTCCGGGTTACGTAGGTTACGAAGAGGGCGGTGTTTTAACCGAAGCTGTTCGCCGTAA
ACCATATAGCGTAGTGTTGTTTGATGAGGTTGAAAAAGCGCATCCAGATGTCTTCAATATCTTGCTACAAGTGTTAGACG
ATGGACGCTTAACCGACTCACAAGGTCGTGTAGTGGACTTTAAAAACACGGTTATTGTGATGACATCGAACTTGGGTTCA
CAAGATGTACGTGAACTTGGTGAAGGTGCAACTGATGATGAAGTGCGTACTATTGTAATGAATGCGGTAAGTCAGCATTT
CCGTCCGGAGTTTATTAACCGGATTGATGAGCTGGTGATTTTCCATTCACTCAAAAAAGCACAGATTCGTGGCATTGCCG
ATATTCAGTTAGATCGCTTACGCTCACGACTTGTTGATCGTGATATGAGTTTAACTGTAGATGACAGTGCATTTGACTTA
TTGATTGACGCTGGTTTTGATCCTGTATATGGAGCGCGTCCATTGAAACGTGCAATTCAACAACAGGTTGAAAATACACT
AGCTCAAAAAATCTTGTCAGGTGACTTTGTTGCGGGTGATACCATTTTAGTTAAAGGCGAAAATGGTCACTTAGTGTTTG
ATAAGTTGAAACTCAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
46.774 |
100 |
0.473 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
43.052 |
100 |
0.44 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.601 |
82.189 |
0.383 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.886 |
78.347 |
0.383 |
| clpE | Streptococcus mutans UA159 |
46.866 |
81.723 |
0.383 |
| clpC | Streptococcus pneumoniae D39 |
46.459 |
82.189 |
0.382 |
| clpC | Streptococcus pneumoniae Rx1 |
46.459 |
82.189 |
0.382 |
| clpE | Streptococcus pneumoniae TIGR4 |
48.012 |
79.045 |
0.38 |
| clpE | Streptococcus pneumoniae Rx1 |
48.012 |
79.045 |
0.38 |
| clpE | Streptococcus pneumoniae D39 |
48.012 |
79.045 |
0.38 |
| clpE | Streptococcus pneumoniae R6 |
48.012 |
79.045 |
0.38 |