Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW30_RS00220 | Genome accession | NZ_CP035962 |
| Coordinates | 40497..40781 (-) | Length | 94 a.a. |
| NCBI ID | WP_002063374.1 | Uniprot ID | J9BXR7 |
| Organism | Bacillus mycoides strain BPN07/3 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 35497..45781
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW30_RS00185 (EXW30_00185) | tmk | 35651..36277 (+) | 627 | WP_002107283.1 | dTMP kinase | - |
| EXW30_RS00190 (EXW30_00190) | holB | 36313..37296 (+) | 984 | WP_002159641.1 | DNA polymerase III subunit delta' | - |
| EXW30_RS00195 (EXW30_00195) | - | 37302..38129 (+) | 828 | WP_002144546.1 | stage 0 sporulation family protein | - |
| EXW30_RS00200 (EXW30_00200) | yabA | 38144..38494 (+) | 351 | WP_002009639.1 | DNA replication initiation control protein YabA | - |
| EXW30_RS00205 (EXW30_00205) | - | 38615..39355 (+) | 741 | WP_016106811.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| EXW30_RS00210 (EXW30_00210) | - | 39342..39632 (+) | 291 | WP_002107287.1 | GIY-YIG nuclease family protein | - |
| EXW30_RS00215 (EXW30_00215) | rsmI | 39601..40476 (+) | 876 | WP_002159640.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| EXW30_RS00220 (EXW30_00220) | abrB | 40497..40781 (-) | 285 | WP_002063374.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW30_RS00225 (EXW30_00225) | metG | 41151..43133 (+) | 1983 | WP_234879607.1 | methionine--tRNA ligase | - |
| EXW30_RS00230 (EXW30_00230) | - | 43299..44066 (+) | 768 | WP_002159638.1 | TatD family hydrolase | - |
| EXW30_RS00235 (EXW30_00235) | rnmV | 44327..44884 (+) | 558 | WP_002159637.1 | ribonuclease M5 | - |
| EXW30_RS00240 (EXW30_00240) | rsmA | 44881..45759 (+) | 879 | WP_002091590.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10490.17 Da Isoelectric Point: 4.7283
>NTDB_id=345298 EXW30_RS00220 WP_002063374.1 40497..40781(-) (abrB) [Bacillus mycoides strain BPN07/3]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDEEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDEEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=345298 EXW30_RS00220 WP_002063374.1 40497..40781(-) (abrB) [Bacillus mycoides strain BPN07/3]
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTGGATGAAGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGTAAAGAAGGCGCTGAA
CAGGTCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTGGATGAAGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGTAAAGAAGGCGCTGAA
CAGGTCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
82.979 |
100 |
0.83 |