Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   EXW58_RS18370 Genome accession   NZ_CP035953
Coordinates   3601103..3601561 (+) Length   152 a.a.
NCBI ID   WP_002066920.1    Uniprot ID   A0A366GHE8
Organism   Bacillus mycoides strain BPN03/1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3596103..3606561
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW58_RS18355 (EXW58_18600) - 3596767..3597003 (+) 237 WP_002145984.1 hypothetical protein -
  EXW58_RS18360 (EXW58_18605) - 3597170..3599278 (-) 2109 WP_215582168.1 polyphosphate kinase -
  EXW58_RS18365 (EXW58_18610) - 3599387..3600961 (-) 1575 WP_215579508.1 Ppx/GppA family phosphatase -
  EXW58_RS18370 (EXW58_18615) kre 3601103..3601561 (+) 459 WP_002066920.1 YkyB family protein Regulator
  EXW58_RS18375 (EXW58_18620) - 3601593..3602255 (-) 663 WP_002066948.1 YkyA family protein -
  EXW58_RS18380 (EXW58_18625) - 3602809..3603462 (-) 654 WP_078172896.1 diguanylate cyclase -
  EXW58_RS18385 (EXW58_18630) - 3603627..3603860 (+) 234 WP_002160664.1 phage holin -
  EXW58_RS18390 (EXW58_18635) - 3603892..3604392 (-) 501 WP_002160663.1 hypothetical protein -
  EXW58_RS18395 (EXW58_18640) - 3604854..3606395 (+) 1542 WP_078172895.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17758.44 Da        Isoelectric Point: 10.6793

>NTDB_id=345274 EXW58_RS18370 WP_002066920.1 3601103..3601561(+) (kre) [Bacillus mycoides strain BPN03/1]
MKPSQPQSQLHNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKDDFRTLPHLGHLESSYRNPKTTLSLTIAKKTLQDYIGPEALKQEKKLSEAVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=345274 EXW58_RS18370 WP_002066920.1 3601103..3601561(+) (kre) [Bacillus mycoides strain BPN03/1]
ATGAAACCTTCACAACCCCAATCTCAATTACATAATCAACATTCTATTAATAGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAACCCTAAGTACTTATATTGGTTAAAAAAGACTGCTTTAGAACGCTTAATTACTGAAA
AAAAGGCTATCAAAGAAGGATTACATTTTTCTAGAAATCCACGTTTTAGTCAACAACAATCCGATGTTCTTATACGTTTA
GGTGATTATTTTTTCCATATCCCTCCTACGAAAGATGATTTTCGCACCCTACCGCATCTTGGTCACCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAATAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTAAAAC
AAGAAAAAAAATTAAGCGAAGCAGTTCCATGGTATAGCCGTACCTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A366GHE8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

63.793

76.316

0.487

Multiple sequence alignment