Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW58_RS09255 | Genome accession | NZ_CP035953 |
| Coordinates | 1815355..1815642 (+) | Length | 95 a.a. |
| NCBI ID | WP_002148618.1 | Uniprot ID | J8DCP1 |
| Organism | Bacillus mycoides strain BPN03/1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
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Genomic Context
Location: 1810355..1820642
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW58_RS09235 (EXW58_09350) | - | 1811526..1811726 (+) | 201 | WP_215581385.1 | DUF4083 domain-containing protein | - |
| EXW58_RS09240 (EXW58_09355) | - | 1811754..1812215 (+) | 462 | WP_002158230.1 | NUDIX hydrolase | - |
| EXW58_RS09245 (EXW58_09360) | nadE | 1812265..1813083 (-) | 819 | WP_002158229.1 | ammonia-dependent NAD(+) synthetase | - |
| EXW58_RS09250 (EXW58_09365) | - | 1813354..1815234 (+) | 1881 | WP_215581387.1 | FtsX-like permease family protein | - |
| EXW58_RS09255 (EXW58_09370) | abrB | 1815355..1815642 (+) | 288 | WP_002148618.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW58_RS09260 (EXW58_09375) | - | 1815823..1816773 (+) | 951 | WP_002158227.1 | serine protease | - |
| EXW58_RS09265 | - | 1816814..1816903 (-) | 90 | Protein_1745 | transcriptional regulator | - |
| EXW58_RS09270 (EXW58_09380) | - | 1816903..1817520 (+) | 618 | Protein_1746 | aldo/keto reductase | - |
| EXW58_RS09275 (EXW58_09385) | - | 1817629..1817853 (-) | 225 | WP_002158225.1 | hypothetical protein | - |
| EXW58_RS09280 (EXW58_09390) | - | 1817938..1818285 (-) | 348 | WP_002158224.1 | DUF4257 domain-containing protein | - |
| EXW58_RS09285 (EXW58_09395) | - | 1818482..1819009 (+) | 528 | WP_016104598.1 | DinB family protein | - |
| EXW58_RS09290 (EXW58_09400) | rsgA | 1819192..1820244 (+) | 1053 | WP_002158222.1 | ribosome small subunit-dependent GTPase A | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10621.33 Da Isoelectric Point: 5.1423
>NTDB_id=345267 EXW58_RS09255 WP_002148618.1 1815355..1815642(+) (abrB) [Bacillus mycoides strain BPN03/1]
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGSITVSIEGAK
HVIKEIEQFLNKSEI
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGSITVSIEGAK
HVIKEIEQFLNKSEI
Nucleotide
Download Length: 288 bp
>NTDB_id=345267 EXW58_RS09255 WP_002148618.1 1815355..1815642(+) (abrB) [Bacillus mycoides strain BPN03/1]
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGAGATGTATTAGG
AATACAAATTAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGACCAAAATATTTCATTAGCAAATGGAAGCATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTGAGATTTAG
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGAGATGTATTAGG
AATACAAATTAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGACCAAAATATTTCATTAGCAAATGGAAGCATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTGAGATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
57.778 |
94.737 |
0.547 |