Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | EXW58_RS06185 | Genome accession | NZ_CP035953 |
| Coordinates | 1210437..1210760 (-) | Length | 107 a.a. |
| NCBI ID | WP_002064339.1 | Uniprot ID | J8AHG1 |
| Organism | Bacillus mycoides strain BPN03/1 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
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Genomic Context
Location: 1205437..1215760
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW58_RS06160 (EXW58_06260) | - | 1205735..1207021 (+) | 1287 | WP_215580984.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| EXW58_RS06165 (EXW58_06265) | sipW | 1207223..1207792 (+) | 570 | WP_016104223.1 | signal peptidase I SipW | - |
| EXW58_RS06170 (EXW58_06270) | - | 1207854..1208441 (+) | 588 | WP_002201286.1 | CalY family protein | - |
| EXW58_RS06175 (EXW58_06275) | - | 1208562..1209374 (+) | 813 | WP_215580986.1 | DUF4047 domain-containing protein | - |
| EXW58_RS06180 (EXW58_06280) | calY | 1209762..1210355 (+) | 594 | WP_215580988.1 | biofilm matrix protein CalY | - |
| EXW58_RS06185 (EXW58_06285) | sinR | 1210437..1210760 (-) | 324 | WP_002064339.1 | helix-turn-helix domain-containing protein | Regulator |
| EXW58_RS06190 (EXW58_06290) | - | 1210840..1210974 (-) | 135 | WP_002011474.1 | anti-repressor SinI family protein | - |
| EXW58_RS06195 (EXW58_06295) | inhA1 | 1211316..1213703 (+) | 2388 | WP_215580990.1 | M6 family metalloprotease immune inhibitor InhA1 | - |
| EXW58_RS06200 (EXW58_06300) | - | 1213874..1215241 (+) | 1368 | WP_215580992.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12320.06 Da Isoelectric Point: 7.2050
>NTDB_id=345264 EXW58_RS06185 WP_002064339.1 1210437..1210760(-) (sinR) [Bacillus mycoides strain BPN03/1]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKISAVLQIPVDTLLHDETTTESHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTQWKKNQQ
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKISAVLQIPVDTLLHDETTTESHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTQWKKNQQ
Nucleotide
Download Length: 324 bp
>NTDB_id=345264 EXW58_RS06185 WP_002064339.1 1210437..1210760(-) (sinR) [Bacillus mycoides strain BPN03/1]
ATGATAGGAGAACGTATAAAACGCCTTCGTTTACAAAAGGGCATTTCACTAACAGAACTCGCCGAAAAAGCTGGTGTAGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAAAACCCTTCCATTCAGTTTCTCGAAAAAATTTCAGCTGTTC
TACAAATTCCAGTTGATACGTTACTTCACGATGAAACAACAACAGAAAGTCATCTAGACTCCGAATGGACACAACTCGTT
AAAGATGCGATGAGCTCCGGTGTCTCAAAAGAACAGTTTCGTGAATTTCTTGAATTTACACAATGGAAGAAAAATCAACA
ATAA
ATGATAGGAGAACGTATAAAACGCCTTCGTTTACAAAAGGGCATTTCACTAACAGAACTCGCCGAAAAAGCTGGTGTAGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAAAACCCTTCCATTCAGTTTCTCGAAAAAATTTCAGCTGTTC
TACAAATTCCAGTTGATACGTTACTTCACGATGAAACAACAACAGAAAGTCATCTAGACTCCGAATGGACACAACTCGTT
AAAGATGCGATGAGCTCCGGTGTCTCAAAAGAACAGTTTCGTGAATTTCTTGAATTTACACAATGGAAGAAAAATCAACA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
67.89 |
100 |
0.692 |