Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   GFB63_RS07045 Genome accession   NZ_CP045596
Coordinates   1369474..1370280 (+) Length   268 a.a.
NCBI ID   WP_084825815.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain TK-P3A     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1364474..1375280
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GFB63_RS07025 (GFB63_07215) tuf 1365523..1366719 (+) 1197 WP_084825811.1 elongation factor Tu -
  GFB63_RS07030 (GFB63_07220) tpiA 1366968..1367726 (+) 759 WP_084825812.1 triose-phosphate isomerase -
  GFB63_RS07035 (GFB63_07225) tmk 1367964..1368593 (+) 630 WP_002946312.1 dTMP kinase -
  GFB63_RS07040 (GFB63_07230) - 1368602..1369477 (+) 876 WP_084825814.1 DNA polymerase III subunit delta' -
  GFB63_RS07045 (GFB63_07235) yaaT 1369474..1370280 (+) 807 WP_084825815.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  GFB63_RS07050 (GFB63_07240) yabA 1370267..1370587 (+) 321 WP_002946304.1 DNA replication initiation control protein YabA -
  GFB63_RS07055 (GFB63_07245) rsmI 1370590..1371456 (+) 867 WP_002949974.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  GFB63_RS07060 (GFB63_07250) - 1371513..1372303 (-) 791 Protein_1350 ISL3 family transposase -
  GFB63_RS07070 (GFB63_07260) - 1373988..1374449 (-) 462 Protein_1352 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29706.04 Da        Isoelectric Point: 4.6456

>NTDB_id=345251 GFB63_RS07045 WP_084825815.1 1369474..1370280(+) (yaaT) [Streptococcus thermophilus strain TK-P3A]
MTEVIGIKFEETGAVEYVVPDKNYAKDDFVVVLEKKDKRLAQVVMENTDFPEVSLPADLNRVEGLAGEKDFARYDENLLK
AEKSMGVVADLIAQNQLDMRVVDIVFPLNSSYVRISFVAEKRVDFRQLLKDLATYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGDEIETKDGTGQVVAIDVI
AGTVKVMFEKGGAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=345251 GFB63_RS07045 WP_084825815.1 1369474..1370280(+) (yaaT) [Streptococcus thermophilus strain TK-P3A]
ATGACAGAAGTCATTGGAATAAAATTTGAAGAAACTGGAGCAGTAGAATACGTTGTTCCTGATAAAAATTACGCCAAAGA
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGCCTAGCCCAGGTTGTCATGGAGAACACAGATTTTCCTGAGGTTA
GTTTGCCTGCGGATTTGAATCGGGTTGAAGGATTGGCAGGAGAGAAAGATTTTGCTAGATATGATGAAAATCTTTTGAAG
GCTGAAAAGAGTATGGGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTTGATATGAGGGTGGTGGATATTGTCTTTCC
CCTAAATAGCTCATACGTGCGTATCAGTTTTGTGGCTGAAAAGCGGGTAGATTTTCGTCAGTTGCTCAAGGATTTGGCGA
CTTACTTTAAGACACGTATTGAGTTACGTCAGATTTCAAGTCGTGAGGAATCAAAAATCTATGGTGGCTTAGGACCTTGT
GGTCGGGCACTTTGTTGTTCTAGTTTTTTGGGTGAATTCCCACCAGTATCGATTAAGATGGCTAAAAATCAGAGTTTATC
TTTGAATTCTGGTAAGATGAATGGGGTCTGTGGTCGACTTATGTGTTGTCTCAGTTATGAAGATGACTTTTACCGAGATA
GCAAGGCAAGTTATCCTGACTTGGGTGATGAAATTGAAACCAAGGATGGCACGGGTCAGGTCGTTGCCATTGATGTGATT
GCAGGGACTGTTAAAGTTATGTTTGAAAAAGGGGGAGCTCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

41.573

99.627

0.414

Multiple sequence alignment