Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   EXN22_RS03520 Genome accession   NZ_CP035952
Coordinates   756140..756550 (+) Length   136 a.a.
NCBI ID   WP_130262692.1    Uniprot ID   A0A411MDE5
Organism   Pseudomonas tructae strain SNU WT1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 751140..761550
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXN22_RS03490 (EXN22_03490) pyrR 751238..751756 (-) 519 WP_130262682.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  EXN22_RS03495 (EXN22_03495) ruvX 751819..752250 (-) 432 WP_038997540.1 Holliday junction resolvase RuvX -
  EXN22_RS03500 (EXN22_03500) - 752250..752819 (-) 570 WP_130262684.1 YqgE/AlgH family protein -
  EXN22_RS03505 (EXN22_03505) - 752890..753870 (-) 981 WP_130262686.1 ankyrin repeat domain-containing protein -
  EXN22_RS03510 (EXN22_03510) - 753953..754858 (-) 906 WP_130262688.1 energy transducer TonB -
  EXN22_RS03515 (EXN22_03515) gshB 754968..755921 (-) 954 WP_130262690.1 glutathione synthase -
  EXN22_RS03520 (EXN22_03520) pilG 756140..756550 (+) 411 WP_130262692.1 twitching motility response regulator PilG Regulator
  EXN22_RS03525 (EXN22_03525) pilH 756593..756958 (+) 366 WP_130262694.1 twitching motility response regulator PilH -
  EXN22_RS03530 (EXN22_03530) - 756955..757509 (+) 555 WP_130262696.1 chemotaxis protein CheW -
  EXN22_RS03535 (EXN22_03535) - 757525..759570 (+) 2046 WP_130262698.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14969.26 Da        Isoelectric Point: 5.1866

>NTDB_id=345231 EXN22_RS03520 WP_130262692.1 756140..756550(+) (pilG) [Pseudomonas tructae strain SNU WT1]
MEQPGAALKVMVIDDSKTIRRTAQMLLTEAGCEVITAIDGFDALAKIIDHQPQVIFVDVLMPRLDGYQTCALIKQNSSFK
DTPVILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRTHVPGFAAEEQHAP

Nucleotide


Download         Length: 411 bp        

>NTDB_id=345231 EXN22_RS03520 WP_130262692.1 756140..756550(+) (pilG) [Pseudomonas tructae strain SNU WT1]
ATGGAACAGCCCGGCGCGGCATTGAAGGTAATGGTGATCGACGACTCCAAGACGATTCGCCGCACCGCCCAGATGTTGCT
CACTGAAGCAGGATGTGAGGTCATTACGGCCATCGACGGTTTCGATGCCCTGGCCAAGATCATCGACCACCAGCCACAGG
TCATCTTCGTCGACGTGCTGATGCCGCGTCTGGACGGTTACCAGACCTGCGCCCTGATCAAGCAGAACAGCAGCTTCAAG
GACACGCCGGTGATACTCCTGTCGTCCCGCGATGGCTTGTTCGACAAGGCTCGCGGTCGTGTCGTTGGATCTGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGATGCAATCCGCACCCATGTGCCCGGATTCGCCGCAGAAGAACAAC
ACGCACCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A411MDE5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

68.8

91.912

0.632

Multiple sequence alignment