Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   PMF13cell1_RS18320 Genome accession   NZ_CP035945
Coordinates   4161972..4163735 (-) Length   587 a.a.
NCBI ID   WP_018594092.1    Uniprot ID   A0A4P6LZD2
Organism   Blautia producta strain PMF1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 4156972..4168735
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PMF13cell1_RS18300 (PMF13cell1_03664) - 4158304..4159125 (-) 822 WP_130181642.1 glycosyltransferase family 8 protein -
  PMF13cell1_RS18305 (PMF13cell1_03665) - 4159146..4159634 (-) 489 WP_130181643.1 MarR family winged helix-turn-helix transcriptional regulator -
  PMF13cell1_RS18310 - 4159901..4160116 (-) 216 WP_130181644.1 hypothetical protein -
  PMF13cell1_RS18315 (PMF13cell1_03666) rcrQ 4160144..4161979 (-) 1836 WP_205730520.1 ABC transporter ATP-binding protein Regulator
  PMF13cell1_RS18320 (PMF13cell1_03667) rcrP 4161972..4163735 (-) 1764 WP_018594092.1 ABC transporter ATP-binding protein Regulator
  PMF13cell1_RS18325 (PMF13cell1_03668) - 4163960..4164541 (-) 582 WP_130181645.1 CDP-alcohol phosphatidyltransferase family protein -
  PMF13cell1_RS18330 (PMF13cell1_03669) - 4164545..4164979 (-) 435 WP_130181646.1 MarR family winged helix-turn-helix transcriptional regulator -
  PMF13cell1_RS18335 - 4165119..4165433 (-) 315 WP_243125934.1 AI-2E family transporter -
  PMF13cell1_RS18340 (PMF13cell1_03670) - 4165637..4166449 (-) 813 WP_130181647.1 MerR family transcriptional regulator -
  PMF13cell1_RS29370 - 4166699..4167140 (+) 442 Protein_3616 ATP-binding cassette domain-containing protein -
  PMF13cell1_RS18350 (PMF13cell1_03671) - 4167178..4167861 (+) 684 WP_130181648.1 putative ABC transporter permease -

Sequence

Protein


Download         Length: 587 a.a.        Molecular weight: 64623.10 Da        Isoelectric Point: 6.1969

>NTDB_id=345204 PMF13cell1_RS18320 WP_018594092.1 4161972..4163735(-) (rcrP) [Blautia producta strain PMF1]
MIKILKNLTKKEWGFTAICLGLIIIQVWLDLTLPEYMGDITELVQTPGSEMNEILAAGGRMLLLASGSLAVSVVIAGLAA
RISTNLASRLRTNLFKKVQSFTMQEINNFSIPSLITRTTNDITQVQMLVVIGLQILIKSPILAVWAIVKILDKGWQWSLA
TGIAVIALLVVSIVMIALAIPKFKQLQQQTDDLSRVSRENLTGLRVVRAYNAEGYQENKFAKANDAFTNTNLFSYRLMAA
LMPSVELIMNGLTLSVYWIGAVLISSAAVMERLPIFSDMMVFSSYAIQLLMAFMMLVMVLILIPRASVSANRICEVLETD
PALRDGTINELHTAEPGRVEFKHVSFRYPDAEDYVLQDISFQANKGETVAFIGATGCGKSTVINLIPRFYDATEGGVYVD
GINVKDFTQAALRNKIGYVSQKAVLFKGDVASNVSFGSNGTDGVSKEAVVSAITTAQSRDFVENMDDSYQSYIAPGGTNL
SGGQKQRLSIARAIARDPEILIFDDSFSALDYKTDKILRRELRLRAADATIIIVAQRIGTIKDADRIIVLEEGRIAGMGT
HRELMKSCDLYKEIAHSQLSKEELENE

Nucleotide


Download         Length: 1764 bp        

>NTDB_id=345204 PMF13cell1_RS18320 WP_018594092.1 4161972..4163735(-) (rcrP) [Blautia producta strain PMF1]
TTGATCAAAATACTGAAAAATTTAACCAAAAAAGAATGGGGTTTTACCGCCATATGCCTGGGACTCATCATCATACAGGT
ATGGCTTGATTTGACCCTGCCGGAATACATGGGTGATATCACAGAGCTTGTCCAGACACCCGGCAGCGAAATGAATGAAA
TCTTAGCCGCCGGGGGCAGAATGCTGCTGCTGGCCTCCGGTAGCCTTGCGGTTTCTGTTGTCATCGCCGGACTTGCCGCC
CGGATTTCTACCAACCTGGCTTCCCGCCTGAGGACCAATTTATTTAAAAAAGTCCAATCGTTCACCATGCAGGAAATTAA
CAACTTTTCCATACCCAGCCTTATTACGAGAACTACCAACGATATCACGCAGGTTCAGATGCTTGTGGTGATTGGTCTGC
AAATTCTGATTAAATCTCCCATATTGGCTGTGTGGGCCATTGTAAAGATTTTAGACAAAGGATGGCAGTGGTCCCTGGCT
ACCGGCATTGCCGTTATTGCGCTGCTGGTGGTATCGATAGTCATGATTGCTCTGGCAATTCCCAAATTCAAACAGCTCCA
GCAGCAAACCGATGATCTGAGCCGTGTCTCCAGGGAAAATCTCACCGGGCTCCGGGTTGTCCGCGCCTACAACGCAGAGG
GATATCAGGAGAATAAGTTTGCAAAGGCCAATGACGCCTTCACAAACACCAACTTGTTTTCCTACCGCCTGATGGCAGCG
CTTATGCCCTCAGTGGAGCTTATTATGAATGGCCTGACCTTATCTGTATACTGGATTGGCGCTGTGCTAATTTCGTCGGC
AGCGGTAATGGAACGTTTGCCCATCTTCTCAGATATGATGGTGTTTTCCTCCTATGCTATTCAATTGCTCATGGCATTCA
TGATGCTGGTAATGGTTTTAATCCTGATTCCCCGTGCCAGTGTATCTGCAAACCGTATCTGCGAAGTCCTTGAGACAGAC
CCTGCCCTTCGGGACGGAACTATTAACGAGCTGCATACCGCCGAACCCGGCCGGGTGGAATTTAAACATGTAAGTTTCCG
CTATCCGGATGCAGAGGACTATGTACTTCAGGATATCAGCTTCCAGGCAAATAAAGGGGAGACGGTTGCCTTTATCGGTG
CCACAGGCTGCGGAAAAAGTACCGTCATCAACCTGATACCGAGATTTTATGACGCCACGGAAGGCGGGGTTTATGTAGAC
GGCATCAATGTGAAGGATTTTACTCAGGCGGCTTTGCGAAATAAGATTGGCTATGTTTCCCAGAAAGCCGTTCTTTTCAA
AGGGGATGTGGCTTCTAACGTGTCTTTTGGCTCCAATGGAACCGATGGTGTCAGCAAGGAGGCGGTTGTTTCTGCCATCA
CCACTGCCCAGAGCAGGGATTTTGTGGAAAATATGGATGATTCTTACCAAAGCTATATTGCCCCCGGCGGCACCAACCTC
TCCGGCGGTCAAAAACAGCGTCTTTCCATTGCGAGAGCCATCGCAAGAGACCCGGAAATCCTGATTTTTGACGACAGTTT
TTCTGCCCTTGATTATAAAACCGATAAGATCCTGCGAAGAGAACTGCGCCTCAGGGCAGCGGACGCCACCATTATTATTG
TTGCGCAACGAATTGGAACCATCAAAGATGCCGACAGGATCATCGTTCTGGAAGAAGGCAGAATTGCCGGTATGGGAACC
CACCGGGAATTGATGAAATCCTGTGATTTGTATAAGGAAATTGCCCATTCCCAGCTTTCAAAGGAGGAATTAGAGAATGA
ATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(356-506)

ABC transporter transmembrane region (ABC_membrane)

(18-293)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4P6LZD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

48.662

100

0.496

Multiple sequence alignment