Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   PMF13cell1_RS18315 Genome accession   NZ_CP035945
Coordinates   4160144..4161979 (-) Length   611 a.a.
NCBI ID   WP_205730520.1    Uniprot ID   A0A4P6M330
Organism   Blautia producta strain PMF1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 4155144..4166979
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PMF13cell1_RS18290 - 4156421..4156756 (+) 336 WP_130181641.1 hypothetical protein -
  PMF13cell1_RS18295 (PMF13cell1_03663) - 4156809..4158113 (+) 1305 WP_243126161.1 patatin-like phospholipase family protein -
  PMF13cell1_RS18300 (PMF13cell1_03664) - 4158304..4159125 (-) 822 WP_130181642.1 glycosyltransferase family 8 protein -
  PMF13cell1_RS18305 (PMF13cell1_03665) - 4159146..4159634 (-) 489 WP_130181643.1 MarR family winged helix-turn-helix transcriptional regulator -
  PMF13cell1_RS18310 - 4159901..4160116 (-) 216 WP_130181644.1 hypothetical protein -
  PMF13cell1_RS18315 (PMF13cell1_03666) rcrQ 4160144..4161979 (-) 1836 WP_205730520.1 ABC transporter ATP-binding protein Regulator
  PMF13cell1_RS18320 (PMF13cell1_03667) rcrP 4161972..4163735 (-) 1764 WP_018594092.1 ABC transporter ATP-binding protein Regulator
  PMF13cell1_RS18325 (PMF13cell1_03668) - 4163960..4164541 (-) 582 WP_130181645.1 CDP-alcohol phosphatidyltransferase family protein -
  PMF13cell1_RS18330 (PMF13cell1_03669) - 4164545..4164979 (-) 435 WP_130181646.1 MarR family winged helix-turn-helix transcriptional regulator -
  PMF13cell1_RS18335 - 4165119..4165433 (-) 315 WP_243125934.1 AI-2E family transporter -
  PMF13cell1_RS18340 (PMF13cell1_03670) - 4165637..4166449 (-) 813 WP_130181647.1 MerR family transcriptional regulator -

Sequence

Protein


Download         Length: 611 a.a.        Molecular weight: 67803.10 Da        Isoelectric Point: 8.9269

>NTDB_id=345203 PMF13cell1_RS18315 WP_205730520.1 4160144..4161979(-) (rcrQ) [Blautia producta strain PMF1]
MNNDKITENQAAPEMDVSDFSGLGGTVQKAKDTKKTVKALLSYSKKYIAIIIMAVTAAIAGTVIALVSPEKLKDMTNLIT
DGIMTSLDMSDIAKIGILLVVLYLLSTILNTIQGWIMATVTQRISQKMRTDISQKINRLPMWFYHKNTTGDILSRITNDV
DSLGQNLNNSLTTLVSSATMLAGSLIMMFKTNWIMTVTAIASVILGFLVMMLIMSKSQKHFDNQQKYLGKINGHIEETYT
GHTIVKAYNAEQQMYEPFKSINKKLNKSTYMAQFLSGLMMPVMTFVDNLGYVAVIVVGAALALKGHISFGVIVAFLVYVR
YFTQPLTQIAQLAQGLQMAVAAGERVFEFLDAEEMADESHKKIKPQTVTGHVEFRNVKFGYEGTDKIIIHNFSAEARPGQ
KIAIVGPTGAGKTTLVNLLMRFNEINSGDILIDGIPIRQMTREQVHSLFCMVLQDTWLFEGTIRENIVYNKKNVTVEMLK
QACKAVGLHHFIRTLPKGYDTVINDKISLSAGQRQQITIARAMIDNAPMLILDEATSSIDTRTEALIQNAMDKLMQGRTS
FVIAHRLSTIKNADIILVLKDGDIIESGSHTELMEKGGFYAELYNSQFEVA

Nucleotide


Download         Length: 1836 bp        

>NTDB_id=345203 PMF13cell1_RS18315 WP_205730520.1 4160144..4161979(-) (rcrQ) [Blautia producta strain PMF1]
ATGAATAATGATAAAATTACGGAAAACCAGGCTGCACCGGAGATGGACGTCTCTGATTTTTCCGGTTTGGGAGGAACCGT
CCAAAAGGCAAAGGATACCAAAAAAACAGTAAAGGCCCTGCTCTCCTATTCCAAAAAGTATATCGCCATCATCATTATGG
CAGTGACCGCTGCGATTGCAGGAACGGTCATCGCTCTGGTCAGTCCTGAAAAGCTCAAGGATATGACCAATCTCATAACC
GATGGCATCATGACAAGCCTTGATATGTCCGACATTGCCAAAATCGGGATTCTTCTGGTTGTGCTTTATCTGTTGAGTAC
AATCTTAAACACCATACAAGGATGGATCATGGCAACAGTCACCCAGAGGATTTCCCAGAAAATGAGAACCGATATCAGCC
AGAAAATCAACCGTCTGCCCATGTGGTTTTACCATAAAAACACCACCGGGGATATCCTTTCCCGTATCACCAATGATGTG
GACTCTCTGGGACAGAACCTGAATAACAGTCTGACTACCCTTGTGTCATCTGCCACTATGCTGGCCGGTTCCCTGATTAT
GATGTTCAAAACCAACTGGATTATGACTGTCACAGCCATTGCTTCAGTCATTCTTGGCTTTTTAGTAATGATGCTCATCA
TGAGTAAGTCCCAGAAGCATTTTGACAACCAGCAGAAATATCTTGGAAAAATTAATGGCCACATCGAAGAAACCTACACC
GGACATACCATTGTGAAAGCCTATAATGCTGAACAGCAGATGTATGAGCCATTCAAGAGTATTAATAAAAAACTGAACAA
GAGCACCTATATGGCTCAATTTCTCTCCGGGCTGATGATGCCCGTCATGACCTTTGTAGATAACCTGGGCTATGTGGCAG
TTATTGTGGTAGGCGCCGCTTTGGCGCTGAAAGGCCATATCTCCTTTGGAGTAATCGTGGCGTTTTTGGTGTATGTGCGT
TATTTCACCCAGCCACTCACACAGATTGCCCAGCTGGCACAGGGGTTGCAGATGGCGGTTGCCGCCGGTGAACGTGTCTT
TGAGTTTCTGGACGCAGAAGAAATGGCAGACGAAAGTCATAAGAAGATAAAGCCTCAGACCGTTACCGGACATGTGGAGT
TCAGGAACGTAAAATTTGGTTATGAGGGCACAGATAAGATTATCATCCATAATTTTTCTGCCGAAGCCAGGCCAGGTCAA
AAAATTGCCATTGTAGGTCCCACCGGTGCCGGAAAAACAACCCTGGTCAATCTGCTGATGCGTTTCAATGAAATAAACAG
TGGGGATATCCTGATTGACGGCATTCCAATCCGCCAGATGACAAGGGAGCAGGTCCATTCTCTCTTCTGCATGGTATTGC
AGGATACCTGGCTTTTTGAAGGAACCATCCGGGAAAACATTGTGTATAACAAGAAGAACGTGACCGTTGAAATGCTCAAA
CAGGCATGTAAGGCGGTAGGGCTTCACCACTTCATCCGGACCCTTCCAAAAGGATATGACACGGTGATTAATGATAAGAT
TAGCCTTTCCGCAGGCCAGCGTCAGCAGATTACCATTGCCCGTGCCATGATTGATAATGCCCCCATGCTGATCCTGGATG
AAGCCACAAGCTCCATTGATACCAGAACAGAAGCGCTGATTCAAAACGCCATGGATAAGCTGATGCAGGGACGTACCTCT
TTTGTCATCGCCCACCGGCTGTCCACCATCAAAAATGCAGATATTATCTTAGTGTTAAAAGACGGCGATATTATTGAAAG
CGGCAGTCATACGGAACTGATGGAAAAAGGCGGGTTTTATGCGGAACTTTACAACAGCCAGTTTGAGGTTGCTTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(390-537)

ABC transporter transmembrane region (ABC_membrane)

(51-326)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4P6M330

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

54.138

94.926

0.514

Multiple sequence alignment