Detailed information NTG0345201

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: PMF13cell1_RS15470
• Genome accession: NZ_CP035945
• Coordinates: 3509668..3511044 (+)
• Length: 458 a.a.
• NCBI ID: WP_130181277.1
• Uniprot ID: -
• Organism: Blautia producta strain PMF1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3504668..3516044

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PMF13cell1_RS15455 (PMF13cell1_03093)	-	3506138..3506506 (+)	369	WP_018596704.1	GntR family transcriptional regulator	-
PMF13cell1_RS15460 (PMF13cell1_03094)	-	3506567..3509029 (+)	2463	WP_029469589.1	ATP-dependent Clp protease ATP-binding subunit	-
PMF13cell1_RS15465 (PMF13cell1_03095)	-	3509153..3509566 (+)	414	WP_018596706.1	hypothetical protein	-
PMF13cell1_RS15470 (PMF13cell1_03096)	radA	3509668..3511044 (+)	1377	WP_130181277.1	DNA repair protein RadA	Machinery gene
PMF13cell1_RS15475 (PMF13cell1_03097)	-	3511231..3512157 (+)	927	WP_130181278.1	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 458 a.a.
• Molecular weight: 49435.03 Da
• Isoelectric Point: 6.8185

>NTDB_id=345201 PMF13cell1_RS15470 WP_130181277.1 3509668..3511044(+) (radA) [Blautia producta strain PMF1]
MAKAKKTVFFCQNCGYESAKWMGQCPGCREWNSFVEETVSQGTKKGPGQTAPGAAGGRAGKPMMLSEIDIREDNRIRTSM
DELDRVLGGGVVQGSMVLVGGDPGIGKSTLLLQVCKLLSDSGHKILYISGEESLQQIKMRAQRIGVFNENLRLLCETNLE
TISTTIENEKPEAVIIDSIQTMYNEEVSSAPGSVSQVRESTGILMKIAKGMGISVFIVGHVTKDGSVAGPRVLEHMVDTV
LYFEGDRHASYRILRSVKNRFGSTNEIGVFEMQECGLVEVKNPSQVMLNGRPTDASGTVVVCSLEGTRPILIEIQALVTK
TNFGLPRRTSVGIDYNRVNLLMAVLEKRAGLALGNCDAYVNLAGGMKLGEPAIDLGIVAAIISSYRNRTVDPDTLIFGEV
GLSGEVRGVSQAQQRVKEAEKMGFTTCIMPKANLEGLQGDFKIALIGVGNIKEVMGYI

Nucleotide

• Length: 1377 bp

>NTDB_id=345201 PMF13cell1_RS15470 WP_130181277.1 3509668..3511044(+) (radA) [Blautia producta strain PMF1]
ATGGCAAAGGCTAAAAAGACAGTTTTTTTCTGTCAGAACTGCGGATATGAATCCGCAAAATGGATGGGACAGTGTCCCGG
CTGCCGGGAGTGGAATTCATTTGTGGAGGAGACTGTTTCCCAGGGGACGAAAAAAGGCCCAGGGCAGACTGCCCCCGGTG
CAGCGGGCGGCCGTGCAGGCAAACCTATGATGCTCTCTGAGATAGATATCCGGGAGGACAACCGGATCAGGACCAGTATG
GACGAATTAGACCGGGTACTGGGCGGCGGTGTGGTGCAAGGCTCTATGGTACTGGTGGGAGGAGACCCTGGAATTGGAAA
ATCCACGCTTCTTCTGCAGGTATGTAAACTGCTTTCTGATTCAGGCCATAAAATCCTATATATATCAGGAGAAGAATCCC
TCCAACAGATAAAAATGCGGGCACAGCGTATCGGAGTATTCAATGAGAATCTGCGCCTTCTCTGTGAGACGAATCTGGAG
ACCATCAGCACAACAATAGAAAATGAGAAGCCGGAGGCAGTCATCATTGACTCGATCCAGACAATGTATAATGAGGAAGT
GTCCTCAGCACCGGGGAGCGTTTCCCAGGTCCGGGAATCCACCGGTATTTTGATGAAGATTGCAAAAGGAATGGGAATAT
CTGTATTCATTGTGGGACATGTGACAAAGGATGGAAGTGTGGCGGGACCCCGTGTATTGGAACATATGGTGGATACGGTA
CTGTATTTCGAGGGGGATAGACATGCGTCTTACAGGATCCTCAGGAGTGTGAAGAACCGTTTTGGCTCCACCAATGAAAT
CGGCGTATTTGAGATGCAGGAGTGCGGGCTTGTGGAGGTGAAAAACCCATCCCAGGTCATGCTGAACGGCCGTCCTACAG
ATGCGTCAGGGACTGTGGTAGTGTGCTCTCTGGAGGGAACACGTCCCATATTGATCGAGATCCAGGCTTTGGTCACAAAG
ACTAATTTCGGTCTGCCCAGAAGAACTTCTGTGGGTATTGACTATAACCGGGTTAATTTACTTATGGCAGTTTTGGAGAA
ACGTGCAGGCCTGGCACTGGGAAACTGTGATGCATACGTCAATCTTGCGGGCGGAATGAAGCTGGGGGAGCCGGCTATTG
ATCTGGGAATCGTGGCGGCTATCATATCCAGCTACAGGAACAGAACGGTGGACCCGGATACCCTGATTTTCGGCGAGGTC
GGTTTGTCGGGCGAGGTGCGGGGCGTCAGTCAGGCACAGCAGAGGGTGAAAGAGGCGGAAAAAATGGGATTTACCACCTG
TATTATGCCGAAAGCAAATCTGGAAGGGCTGCAGGGGGATTTTAAAATCGCCTTGATCGGAGTGGGTAATATCAAAGAGG
TTATGGGATATATATGA

Domains

Predicted by InterproScan.

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (10-36)

• AAA domain (AAA_25) (72-225)

• Subunit ChlI of Mg-chelatase (ChlI) (349-433)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	58.206	99.782	0.581
radA	Streptococcus mitis NCTC 12261	56.484	99.345	0.561
radA	Streptococcus mitis SK321	56.264	99.345	0.559
radA	Streptococcus pneumoniae Rx1	56.264	99.345	0.559
radA	Streptococcus pneumoniae D39	56.264	99.345	0.559
radA	Streptococcus pneumoniae R6	56.264	99.345	0.559
radA	Streptococcus pneumoniae TIGR4	56.264	99.345	0.559