Detailed information NTG0345158

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: C9E88_RS06760
• Genome accession: NZ_CP035934
• Coordinates: 1431249..1431914 (+)
• Length: 221 a.a.
• NCBI ID: WP_106985801.1
• Uniprot ID: -
• Organism: Acinetobacter cumulans strain WCHAc060092
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1426249..1436914

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C9E88_RS06725 (C9E88_013715)	kdsB	1426748..1427509 (+)	762	WP_106985808.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
C9E88_RS06730 (C9E88_013710)	-	1427522..1428502 (+)	981	WP_106985807.1	DNA polymerase III subunit delta'	-
C9E88_RS06735 (C9E88_013705)	-	1428516..1428857 (+)	342	WP_106985806.1	PilZ domain-containing protein	-
C9E88_RS06740 (C9E88_013700)	-	1428887..1429660 (+)	774	WP_106985805.1	TatD family hydrolase	-
C9E88_RS06745 (C9E88_013695)	-	1429704..1430318 (+)	615	WP_106985804.1	TetR/AcrR family transcriptional regulator	-
C9E88_RS06750 (C9E88_013690)	-	1430328..1430882 (+)	555	WP_106985803.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
C9E88_RS06755 (C9E88_013685)	xcpV	1430872..1431252 (+)	381	WP_106985802.1	type II secretion system minor pseudopilin GspI	Machinery gene
C9E88_RS06760 (C9E88_013680)	xcpW	1431249..1431914 (+)	666	WP_106985801.1	type II secretion system protein GspJ	Machinery gene
C9E88_RS06765 (C9E88_013675)	gspK	1431914..1432873 (+)	960	WP_106985800.1	type II secretion system minor pseudopilin GspK	-
C9E88_RS06770 (C9E88_013670)	-	1432999..1433595 (+)	597	WP_106985799.1	6-carboxytetrahydropterin synthase	-
C9E88_RS06775 (C9E88_013665)	ung	1433641..1434354 (+)	714	WP_106985798.1	uracil-DNA glycosylase	-
C9E88_RS06780 (C9E88_013660)	-	1434351..1435472 (+)	1122	WP_106985797.1	enoyl-CoA hydratase/isomerase family protein	-
C9E88_RS06785 (C9E88_013655)	tadA	1435479..1435997 (+)	519	WP_106985796.1	tRNA adenosine(34) deaminase TadA	-
C9E88_RS06790 (C9E88_013650)	-	1436058..1436489 (+)	432	WP_106985795.1	SRPBCC family protein	-

Sequence

Protein

• Length: 221 a.a.
• Molecular weight: 24666.06 Da
• Isoelectric Point: 7.0167

>NTDB_id=345158 C9E88_RS06760 WP_106985801.1 1431249..1431914(+) (xcpW) [Acinetobacter cumulans strain WCHAc060092]
MKLKKAWGFTLVELLVAIAIFAVLSALGWKVFDYIAKVKTQNAMHESKLGQLQESYKQILRDTMQAVPLTANIAGQVQAA
LTLQNNKLAFSKTGVTDPLNQGVAADERVEYVYRQDEQKLYRLKYPNINQSGRDQPDSSVLLNGVEQYQITVLNPNELTT
WPDSVGNLSSDAEKQRLPRGLKLNLTVNGVSYEWIFSLLNTDFLEEKKTVSTPDGNQGVSS

Nucleotide

• Length: 666 bp

>NTDB_id=345158 C9E88_RS06760 WP_106985801.1 1431249..1431914(+) (xcpW) [Acinetobacter cumulans strain WCHAc060092]
ATGAAACTAAAAAAAGCATGGGGTTTTACCTTGGTGGAGTTGTTGGTTGCAATCGCAATTTTTGCGGTATTGTCTGCGCT
GGGTTGGAAAGTGTTTGATTATATTGCAAAAGTCAAAACTCAAAATGCAATGCATGAAAGCAAATTGGGACAATTACAAG
AAAGTTACAAACAAATATTAAGAGATACAATGCAAGCTGTGCCATTGACTGCAAATATTGCTGGACAGGTGCAGGCAGCG
TTAACTTTGCAAAATAACAAATTGGCGTTTAGTAAAACAGGGGTAACCGACCCACTTAATCAAGGTGTGGCTGCGGATGA
GCGGGTAGAATATGTTTATCGTCAAGATGAGCAGAAATTATACCGTTTAAAATATCCAAATATTAATCAATCTGGGCGTG
ATCAGCCAGACAGTAGTGTTTTGCTCAATGGCGTAGAGCAATATCAAATTACAGTATTAAACCCCAATGAGCTCACCACT
TGGCCAGATTCAGTGGGCAACTTAAGTAGTGATGCGGAAAAGCAACGCTTACCGCGCGGGCTTAAGTTGAACTTAACAGT
AAATGGTGTAAGTTATGAGTGGATTTTTAGTTTACTCAATACGGACTTTTTAGAAGAGAAAAAAACTGTTAGCACGCCAG
ATGGTAACCAAGGAGTGTCATCTTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (8-27)

• Type II secretion system (T2SS), protein J (T2SSJ) (61-191)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	57.921	91.403	0.529