Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | C9E88_RS01865 | Genome accession | NZ_CP035934 |
| Coordinates | 410341..410856 (+) | Length | 171 a.a. |
| NCBI ID | WP_106983960.1 | Uniprot ID | - |
| Organism | Acinetobacter cumulans strain WCHAc060092 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 405341..415856
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E88_RS01840 (C9E88_002430) | - | 405341..407446 (-) | 2106 | WP_106983955.1 | HD domain-containing protein | - |
| C9E88_RS01845 (C9E88_002425) | rpoZ | 407666..407947 (-) | 282 | WP_106983956.1 | DNA-directed RNA polymerase subunit omega | - |
| C9E88_RS01850 (C9E88_002420) | gmk | 408024..408647 (-) | 624 | WP_106983957.1 | guanylate kinase | - |
| C9E88_RS01855 (C9E88_002415) | ispH | 408782..409732 (+) | 951 | WP_106983958.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| C9E88_RS01860 (C9E88_002410) | - | 409898..410344 (+) | 447 | WP_106983959.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| C9E88_RS01865 (C9E88_002405) | pilV | 410341..410856 (+) | 516 | WP_106983960.1 | type IV pilus modification protein PilV | Machinery gene |
| C9E88_RS01870 (C9E88_002400) | - | 410857..411801 (+) | 945 | WP_106984099.1 | PilW family protein | - |
| C9E88_RS01875 (C9E88_002395) | - | 411798..412652 (+) | 855 | WP_106983961.1 | pilus assembly PilX N-terminal domain-containing protein | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 18243.70 Da Isoelectric Point: 4.7860
>NTDB_id=345150 C9E88_RS01865 WP_106983960.1 410341..410856(+) (pilV) [Acinetobacter cumulans strain WCHAc060092]
MSARSSQKGVGMVEVLVALIILAIGVLGYVMLQVRAMEATVEGTQRIQAINIARDLAERVRVNRTAWDGTTNTYLTELAG
TQSRASTTPDCASSACNEAQLADFDVAEISTYAMQYGMTLGMSACPNTTGRQCLFVAWGSTLPTNSSSNANSCVNGNAYR
ANSTCVMMEVY
MSARSSQKGVGMVEVLVALIILAIGVLGYVMLQVRAMEATVEGTQRIQAINIARDLAERVRVNRTAWDGTTNTYLTELAG
TQSRASTTPDCASSACNEAQLADFDVAEISTYAMQYGMTLGMSACPNTTGRQCLFVAWGSTLPTNSSSNANSCVNGNAYR
ANSTCVMMEVY
Nucleotide
Download Length: 516 bp
>NTDB_id=345150 C9E88_RS01865 WP_106983960.1 410341..410856(+) (pilV) [Acinetobacter cumulans strain WCHAc060092]
ATGAGCGCAAGATCATCACAAAAGGGTGTTGGTATGGTTGAAGTTTTGGTGGCGCTCATTATTTTAGCTATTGGTGTCTT
GGGTTATGTGATGTTGCAGGTCCGGGCAATGGAGGCAACGGTAGAAGGTACTCAGCGTATTCAAGCAATTAATATTGCAC
GAGATCTTGCTGAGCGCGTGAGAGTGAATCGTACTGCTTGGGATGGTACAACAAACACTTATTTAACAGAACTCGCAGGT
ACGCAATCGCGTGCTAGTACGACTCCAGACTGTGCATCTTCAGCTTGCAATGAAGCTCAACTTGCTGATTTTGATGTGGC
TGAAATATCAACATATGCGATGCAGTATGGCATGACGTTGGGGATGTCTGCTTGTCCTAATACAACAGGGCGACAATGTT
TATTTGTTGCTTGGGGAAGTACTTTGCCTACAAATAGTAGTTCTAATGCGAATTCCTGTGTGAATGGAAATGCATATAGA
GCAAATTCAACGTGTGTAATGATGGAGGTTTACTAA
ATGAGCGCAAGATCATCACAAAAGGGTGTTGGTATGGTTGAAGTTTTGGTGGCGCTCATTATTTTAGCTATTGGTGTCTT
GGGTTATGTGATGTTGCAGGTCCGGGCAATGGAGGCAACGGTAGAAGGTACTCAGCGTATTCAAGCAATTAATATTGCAC
GAGATCTTGCTGAGCGCGTGAGAGTGAATCGTACTGCTTGGGATGGTACAACAAACACTTATTTAACAGAACTCGCAGGT
ACGCAATCGCGTGCTAGTACGACTCCAGACTGTGCATCTTCAGCTTGCAATGAAGCTCAACTTGCTGATTTTGATGTGGC
TGAAATATCAACATATGCGATGCAGTATGGCATGACGTTGGGGATGTCTGCTTGTCCTAATACAACAGGGCGACAATGTT
TATTTGTTGCTTGGGGAAGTACTTTGCCTACAAATAGTAGTTCTAATGCGAATTCCTGTGTGAATGGAAATGCATATAGA
GCAAATTCAACGTGTGTAATGATGGAGGTTTACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Acinetobacter baumannii D1279779 |
45.902 |
100 |
0.491 |
| pilV | Acinetobacter baylyi ADP1 |
39.56 |
100 |
0.421 |