Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | GD578_RS10340 | Genome accession | NZ_CP045560 |
| Coordinates | 2128405..2129511 (-) | Length | 368 a.a. |
| NCBI ID | WP_002050665.1 | Uniprot ID | A0AA36KAS4 |
| Organism | Acinetobacter nosocomialis strain AC1530 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2123405..2134511
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GD578_RS10310 (GD578_10440) | cydB | 2124568..2125713 (+) | 1146 | WP_002050611.1 | cytochrome d ubiquinol oxidase subunit II | - |
| GD578_RS10315 (GD578_10445) | cydX | 2125727..2125828 (+) | 102 | WP_000270276.1 | cytochrome bd-I oxidase subunit CydX | - |
| GD578_RS10320 (GD578_10450) | - | 2125829..2126128 (+) | 300 | WP_079377014.1 | cyd operon YbgE family protein | - |
| GD578_RS10325 (GD578_10455) | - | 2126139..2126663 (-) | 525 | WP_002050626.1 | GNAT family N-acetyltransferase | - |
| GD578_RS10330 (GD578_10460) | - | 2126739..2127410 (-) | 672 | WP_002050610.1 | DUF2057 family protein | - |
| GD578_RS10335 (GD578_10465) | - | 2127622..2128218 (-) | 597 | WP_002050635.1 | nitroreductase family protein | - |
| GD578_RS10340 (GD578_10470) | pilA | 2128405..2129511 (-) | 1107 | WP_002050665.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| GD578_RS10345 (GD578_10475) | - | 2129619..2129945 (-) | 327 | WP_002050644.1 | hypothetical protein | - |
| GD578_RS10350 (GD578_10480) | - | 2130046..2130405 (-) | 360 | WP_002050680.1 | hypothetical protein | - |
| GD578_RS10355 (GD578_10485) | - | 2130621..2130854 (+) | 234 | WP_002050673.1 | hypothetical protein | - |
| GD578_RS10360 (GD578_10495) | - | 2131348..2131722 (+) | 375 | WP_001087274.1 | DUF2750 domain-containing protein | - |
| GD578_RS10365 (GD578_10500) | - | 2131861..2132292 (+) | 432 | WP_002050640.1 | CBS domain-containing protein | - |
| GD578_RS10370 (GD578_10505) | - | 2132344..2133552 (-) | 1209 | WP_002050642.1 | aspartate aminotransferase family protein | - |
| GD578_RS10375 (GD578_10510) | grxD | 2133780..2134121 (+) | 342 | WP_000138830.1 | Grx4 family monothiol glutaredoxin | - |
| GD578_RS10380 (GD578_10515) | - | 2134168..2134491 (-) | 324 | WP_002050660.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 368 a.a. Molecular weight: 39917.75 Da Isoelectric Point: 5.0746
>NTDB_id=345085 GD578_RS10340 WP_002050665.1 2128405..2129511(-) (pilA) [Acinetobacter nosocomialis strain AC1530]
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAPEVVETAPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAPEVVETAPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK
Nucleotide
Download Length: 1107 bp
>NTDB_id=345085 GD578_RS10340 WP_002050665.1 2128405..2129511(-) (pilA) [Acinetobacter nosocomialis strain AC1530]
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCACCAGAAGTTGTCGAGACAGCACCTT
CAACTGAACCAGAGCAACCAAAATCTGGTTTCTTTGGGCGAATGAAAGAAGGTTTAAGCAAAACTCGCCGTAATTTCACC
GATGGTATGGTAAATATCTTAATTGGTGGTAAAGAAATTGATGATGAGCTGCTTGAAGAAGTTGAAGAGCAATTATTAGT
TGCAGATATTGGTGTAGATGCAACAAAAACGATTATTACCAACTTGACTGAACGTACTGCACGTGGCGATTTGATTTATT
CACATTCGCTTTATAAAGCATTACAAGAAGAGTTGGTTGCTTTACTGGCTCCACGTGTGAAGCCTTTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTGGGCGTGAATGGTGTTGGAAAAACAACCACTATTGGTAAACTGGCTAAGCG
TTTACAAGGCGAAGGCAAGAAAGTTATGTTAGCAGCAGGTGACACATTCCGTGCAGCTGCTACTGAACAATTGCAAATTT
GGGGTGAGCGTAACGACATTGCTGTTGTCGCTCAAGGCCATGGTGCAGATAGTGCTTCGGTTATCTTCGATGCTTTTGAA
AGTGCGCGTGCTAAAGGTATTGATGTGTTAATTGCAGATACCGCAGGTCGTTTACATAACAAAAGTAACTTAATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCTACGGCACCTCATGAAATTATGTTAGTAGTAGATGCAGGTA
CGGGGCAAAATGCAATTAACCAAGTACAAGAATTTGATCAAGCAGTAGGTTTAACTGGTATTACTATTACTAAGTTGGAC
GGCACTGCAAAAGGTGGTGTACTGTTTAATATTGCTAGTCGTACTCATGTACCAATTCGTTTTATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCGTTCTCGGCAAAATCATTTGTAGCGGCATTATTTGAAACAGAAAAGTAA
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCACCAGAAGTTGTCGAGACAGCACCTT
CAACTGAACCAGAGCAACCAAAATCTGGTTTCTTTGGGCGAATGAAAGAAGGTTTAAGCAAAACTCGCCGTAATTTCACC
GATGGTATGGTAAATATCTTAATTGGTGGTAAAGAAATTGATGATGAGCTGCTTGAAGAAGTTGAAGAGCAATTATTAGT
TGCAGATATTGGTGTAGATGCAACAAAAACGATTATTACCAACTTGACTGAACGTACTGCACGTGGCGATTTGATTTATT
CACATTCGCTTTATAAAGCATTACAAGAAGAGTTGGTTGCTTTACTGGCTCCACGTGTGAAGCCTTTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTGGGCGTGAATGGTGTTGGAAAAACAACCACTATTGGTAAACTGGCTAAGCG
TTTACAAGGCGAAGGCAAGAAAGTTATGTTAGCAGCAGGTGACACATTCCGTGCAGCTGCTACTGAACAATTGCAAATTT
GGGGTGAGCGTAACGACATTGCTGTTGTCGCTCAAGGCCATGGTGCAGATAGTGCTTCGGTTATCTTCGATGCTTTTGAA
AGTGCGCGTGCTAAAGGTATTGATGTGTTAATTGCAGATACCGCAGGTCGTTTACATAACAAAAGTAACTTAATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCTACGGCACCTCATGAAATTATGTTAGTAGTAGATGCAGGTA
CGGGGCAAAATGCAATTAACCAAGTACAAGAATTTGATCAAGCAGTAGGTTTAACTGGTATTACTATTACTAAGTTGGAC
GGCACTGCAAAAGGTGGTGTACTGTTTAATATTGCTAGTCGTACTCATGTACCAATTCGTTTTATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCGTTCTCGGCAAAATCATTTGTAGCGGCATTATTTGAAACAGAAAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
52.597 |
83.696 |
0.44 |