Detailed information NTG0344912

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: EXE55_RS08580
• Genome accession: NZ_CP035900
• Coordinates: 1900835..1902010 (+)
• Length: 391 a.a.
• NCBI ID: WP_161521125.1
• Uniprot ID: -
• Organism: Burkholderia glumae strain 257sh-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1895835..1907010

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EXE55_RS08555 (EXE55_08690)	hisC	1896269..1897336 (+)	1068	WP_035983605.1	histidinol-phosphate transaminase	-
EXE55_RS08560 (EXE55_08695)	-	1897401..1897670 (-)	270	WP_015877053.1	YfhL family 4Fe-4S dicluster ferredoxin	-
EXE55_RS08565 (EXE55_08700)	-	1897955..1899277 (+)	1323	WP_017424335.1	TIGR00366 family protein	-
EXE55_RS08570 (EXE55_08705)	coaD	1899422..1899922 (-)	501	WP_015877055.1	pantetheine-phosphate adenylyltransferase	-
EXE55_RS08575 (EXE55_08710)	rsmD	1900033..1900647 (-)	615	WP_035983602.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
EXE55_RS08580 (EXE55_08715)	pilA	1900835..1902010 (+)	1176	WP_161521125.1	signal recognition particle-docking protein FtsY	Machinery gene
EXE55_RS08585 (EXE55_08720)	ybiB	1902580..1903557 (+)	978	WP_015877058.1	DNA-binding protein YbiB	-
EXE55_RS08590 (EXE55_08730)	leuA	1903971..1905620 (+)	1650	WP_161521126.1	2-isopropylmalate synthase	-
EXE55_RS08595 (EXE55_08735)	-	1905817..1906203 (-)	387	WP_015877060.1	nuclear transport factor 2 family protein	-
EXE55_RS08600 (EXE55_08740)	-	1906243..1906812 (-)	570	WP_017923408.1	acyloxyacyl hydrolase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 40790.76 Da
• Isoelectric Point: 5.4803

>NTDB_id=344912 EXE55_RS08580 WP_161521125.1 1900835..1902010(+) (pilA) [Burkholderia glumae strain 257sh-1]
MFSFFKRLIGSKADDASQDAPAADEQASAAHAPDAAGHAAAAASRPAPAPAHDAEPAASPAAPVPAAPAPAPAAVPAAPA
VEVVPPPAPEPAAKKSWIARLRSGLSKTSTSLTNVFVNTRIDDELYEELEAALLMSDAGIDATEYLLGALREKVRAERLS
DPLQVKAALRALLVDLLAPLEKSLMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQRFDQSVLLAAGDTFRAAAREQLAI
WGERNNVTVVQQESGDPAAVIFDAVGAARARKIDVVMADTAGRLPTQLHLMEELRKVKRVIGKAQSDAPHEVLLVIDANT
GQNALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPIPVYFIGVGEKVEDLQPFNAEEFADALLG

Nucleotide

• Length: 1176 bp

>NTDB_id=344912 EXE55_RS08580 WP_161521125.1 1900835..1902010(+) (pilA) [Burkholderia glumae strain 257sh-1]
ATGTTCAGCTTCTTCAAACGATTGATCGGCTCGAAGGCCGACGACGCGTCGCAGGACGCGCCGGCGGCCGACGAGCAAGC
CAGCGCGGCTCACGCGCCGGACGCGGCCGGGCATGCCGCCGCCGCGGCGAGCCGGCCGGCGCCCGCGCCGGCACACGACG
CCGAACCCGCCGCCAGCCCGGCTGCACCGGTGCCGGCCGCCCCCGCCCCCGCCCCTGCGGCCGTGCCCGCCGCCCCCGCC
GTCGAAGTCGTGCCGCCGCCCGCGCCTGAGCCGGCCGCGAAAAAATCCTGGATCGCACGACTACGCTCCGGGCTCTCGAA
GACGAGCACGAGCCTCACCAACGTGTTCGTCAATACCAGGATCGACGACGAACTCTACGAGGAGCTCGAAGCCGCGCTGC
TGATGTCCGATGCCGGCATCGACGCGACCGAATACCTGCTCGGCGCGCTGCGCGAGAAGGTGCGCGCCGAACGCCTGAGC
GATCCGCTGCAGGTGAAGGCCGCGCTGCGCGCGCTGCTCGTCGACCTGCTCGCGCCGCTCGAGAAATCGCTGATGCTGGG
CCGCGCCCAGCCGCTCGTGATGATGATCGCGGGCGTCAACGGAGCCGGCAAGACCACCAGCATCGGTAAGCTCGCCAAAC
ACCTGCAGCGCTTCGACCAATCGGTGCTGCTGGCCGCCGGCGACACGTTCCGCGCGGCCGCGCGCGAGCAGCTCGCGATC
TGGGGCGAGCGCAACAACGTGACCGTGGTGCAGCAGGAAAGCGGCGATCCGGCCGCCGTGATATTCGATGCGGTCGGCGC
CGCGCGCGCGCGCAAGATCGACGTGGTGATGGCCGACACCGCGGGCCGGTTGCCCACGCAGTTGCACCTGATGGAGGAAC
TGCGCAAGGTCAAGCGCGTGATCGGCAAGGCGCAGAGCGACGCGCCGCACGAGGTGCTGCTCGTGATCGACGCCAATACC
GGCCAGAACGCGCTCGCCCAGGTGAAGGCATTCGACGACGCGCTGGGCCTGACCGGGCTCATCGTCACCAAGCTCGACGG
CACCGCGAAGGGCGGCATTCTCGCCGCGATCGCGCGGCAGCGGCCGATACCCGTCTACTTCATCGGCGTCGGCGAGAAGG
TCGAGGACTTGCAGCCGTTCAACGCCGAGGAATTCGCCGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (192-391)

• SRP54-type protein, helical bundle domain (SRP54_N) (110-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.537	100	0.558