Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   GEV49_RS13590 Genome accession   NZ_CP045547
Coordinates   3127780..3128763 (-) Length   327 a.a.
NCBI ID   WP_153178100.1    Uniprot ID   -
Organism   Streptomyces sp. SYP-A7193     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 3122780..3133763
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GEV49_RS13570 (GEV49_13640) - 3123647..3124054 (-) 408 WP_228126113.1 DUF3592 domain-containing protein -
  GEV49_RS13575 (GEV49_13645) - 3124145..3124339 (-) 195 WP_007444504.1 hypothetical protein -
  GEV49_RS13580 (GEV49_13650) - 3124526..3126649 (+) 2124 WP_153178098.1 S9 family peptidase -
  GEV49_RS13585 (GEV49_13655) - 3126651..3127787 (-) 1137 WP_153178099.1 ABC transporter ATP-binding protein -
  GEV49_RS13590 (GEV49_13660) amiE 3127780..3128763 (-) 984 WP_153178100.1 ABC transporter ATP-binding protein Regulator
  GEV49_RS13595 (GEV49_13665) - 3128772..3129752 (-) 981 WP_194279935.1 ABC transporter permease -
  GEV49_RS13600 (GEV49_13670) - 3129745..3130668 (-) 924 WP_153178101.1 ABC transporter permease -
  GEV49_RS13605 (GEV49_13675) - 3130678..3132312 (-) 1635 WP_153178102.1 peptide ABC transporter substrate-binding protein -
  GEV49_RS13610 - 3132568..3132732 (+) 165 WP_153178103.1 hypothetical protein -
  GEV49_RS13615 (GEV49_13680) - 3132810..3133325 (+) 516 WP_153178104.1 MauE/DoxX family redox-associated membrane protein -

Sequence


Protein


Download         Length: 327 a.a.        Molecular weight: 36000.76 Da        Isoelectric Point: 6.5719

>NTDB_id=344889 GEV49_RS13590 WP_153178100.1 3127780..3128763(-) (amiE) [Streptomyces sp. SYP-A7193]
MLLEVRDLHVEFRTRDGVAKAVNGVSYGVDAGETLAVLGESGSGKSVTAQTIMGILDIPPGRVTAGEILFEGRDLLKLKE
EERRKVRGAEMAMIFQDALSSLNPVLTVGAQLAEMFTVHRGMSRKDAHAKAVELMDRVRIPAARERVRQYPHQFSGGMRQ
RIMIAMAMALEPKLIIADEPTTALDVTVQAQVMDLLAELQRELHMGLILITHDLGVVADVADKIAVMYAGRIVETAPVHD
IYKAPAHPYTRGLLESIPRLDQKGQELYAIKGLPPNLTRIPPGCAFHPRCPMAQDVCRTDVPPLYDVTESDAERGSACHF
WRECLHG

Nucleotide


Download         Length: 984 bp        

>NTDB_id=344889 GEV49_RS13590 WP_153178100.1 3127780..3128763(-) (amiE) [Streptomyces sp. SYP-A7193]
ATGCTGCTCGAAGTACGCGACCTGCACGTGGAGTTCCGCACCCGGGACGGCGTCGCCAAGGCCGTCAACGGCGTCAGCTA
CGGCGTGGACGCGGGCGAGACCCTCGCGGTGCTCGGCGAGTCCGGCTCCGGCAAGTCCGTCACCGCCCAGACGATCATGG
GCATCCTCGACATCCCGCCGGGCAGGGTCACCGCGGGGGAGATCCTCTTCGAGGGCCGGGACCTGCTGAAGCTGAAGGAG
GAGGAACGCCGGAAGGTCCGCGGCGCCGAGATGGCGATGATCTTCCAGGACGCGCTGTCCTCGCTGAACCCCGTCCTGAC
CGTCGGTGCCCAGCTCGCCGAGATGTTCACCGTGCACCGCGGCATGTCCCGCAAGGACGCCCACGCCAAAGCCGTCGAGC
TGATGGACCGGGTGCGCATCCCGGCCGCCAGGGAGCGGGTGCGGCAGTACCCGCACCAGTTCTCCGGCGGCATGCGCCAG
CGCATCATGATCGCCATGGCGATGGCCCTGGAACCCAAGCTGATCATCGCCGACGAGCCGACCACCGCCCTCGACGTCAC
CGTCCAGGCCCAGGTCATGGACCTGCTCGCGGAGCTCCAGCGCGAGCTGCACATGGGGCTCATCCTCATCACCCACGACC
TCGGCGTGGTCGCCGACGTCGCCGACAAGATCGCGGTCATGTACGCGGGCCGGATCGTGGAGACGGCCCCGGTCCACGAC
ATCTACAAGGCGCCCGCCCACCCCTACACCCGCGGCCTCCTGGAATCCATCCCGCGCCTCGACCAGAAGGGCCAGGAGCT
CTACGCCATCAAGGGCCTGCCGCCCAACCTCACCCGCATCCCGCCCGGCTGCGCCTTCCACCCCCGCTGCCCGATGGCCC
AGGACGTCTGCCGCACCGACGTACCGCCCCTCTACGACGTCACCGAGTCCGACGCCGAGCGGGGCAGCGCCTGCCACTTC
TGGAGGGAGTGCCTGCATGGCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

47.5

97.859

0.465

  amiE Streptococcus thermophilus LMG 18311

46.875

97.859

0.459

  amiE Streptococcus thermophilus LMD-9

46.875

97.859

0.459

  oppD Streptococcus mutans UA159

47.249

94.495

0.446