Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   GEV49_RS10180 Genome accession   NZ_CP045547
Coordinates   2355623..2356402 (+) Length   259 a.a.
NCBI ID   WP_003973219.1    Uniprot ID   Q4QZ22
Organism   Streptomyces sp. SYP-A7193     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2350623..2361402
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GEV49_RS10170 (GEV49_10220) - 2351476..2354379 (-) 2904 WP_153177614.1 vitamin B12-dependent ribonucleotide reductase -
  GEV49_RS10175 (GEV49_10225) nrdR 2354546..2355094 (-) 549 WP_153177615.1 transcriptional regulator NrdR -
  GEV49_RS10180 (GEV49_10230) dinR/lexA 2355623..2356402 (+) 780 WP_003973219.1 transcriptional repressor LexA Regulator
  GEV49_RS10185 (GEV49_10235) - 2356511..2358526 (-) 2016 WP_153177616.1 ATP-dependent DNA helicase -
  GEV49_RS10190 (GEV49_10240) - 2358792..2359484 (-) 693 WP_153177617.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 259 a.a.        Molecular weight: 27958.66 Da        Isoelectric Point: 7.0666

>NTDB_id=344874 GEV49_RS10180 WP_003973219.1 2355623..2356402(+) (dinR/lexA) [Streptomyces sp. SYP-A7193]
MTTTADSATITAQERPQGRPEPVHAMSDAANPEGHKRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQAASVQPTDTAGKPAASYVPLVGRIAAGGPILAEESVED
VFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNSAYEP
IPGDDATILGKVVAVLRRV

Nucleotide


Download         Length: 780 bp        

>NTDB_id=344874 GEV49_RS10180 WP_003973219.1 2355623..2356402(+) (dinR/lexA) [Streptomyces sp. SYP-A7193]
GTGACCACCACCGCCGACAGTGCCACCATCACTGCCCAGGAACGCCCCCAGGGCCGACCTGAGCCGGTACACGCGATGAG
CGACGCCGCGAATCCCGAGGGGCACAAGCGCTCCCTGCCGGGGCGACCTCCCGGCATTCGGGCGGACAGCTCGGGGCTCA
CCGACCGCCAGCGCCGGGTGATCGAGGTCATCCGCGACTCGGTGCAGCGGCGCGGGTACCCGCCGTCGATGCGGGAGATC
GGCCAGGCCGTCGGGCTCTCCAGCACCTCGTCCGTGGCGCACCAGCTGATGGCGCTGGAGCGCAAGGGCTTCCTCCGCCG
GGACCCGCACCGCCCCCGCGCCTACGAGGTGCGCGGCTCCGACCAGGCCGCCTCGGTGCAGCCCACGGACACCGCCGGGA
AGCCGGCCGCGTCGTACGTGCCGCTGGTCGGGCGCATCGCCGCCGGTGGTCCGATCCTCGCCGAGGAGTCCGTCGAGGAC
GTCTTCCCGCTCCCCCGGCAGCTGGTCGGCGACGGTGAGCTGTTCGTCCTGAAGGTCGTCGGCGACTCGATGATCGAGGC
CGCGATCTGCGACGGCGACTGGGTCACGGTCCGTCGCCAGCCGGTCGCCGAGAACGGCGACATCGTGGCCGCCATGCTCG
ACGGCGAGGCCACCGTCAAGCGCTTCAAGCGCGAGGACGGCCACGTCTGGCTCCTCCCGCACAACTCGGCCTACGAGCCG
ATCCCCGGTGACGACGCGACCATCCTCGGCAAGGTGGTGGCCGTACTGCGTCGCGTCTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(51-114)

Peptidase S24-like (Peptidase_S24)

(141-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q4QZ22

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.972

81.467

0.375