Detailed information NTG0344741

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: FPL20_RS16790
• Genome accession: NZ_CP045478
• Coordinates: 3183608..3184597 (-)
• Length: 329 a.a.
• NCBI ID: WP_003232026.1
• Uniprot ID: P51835
• Organism: Bacillus subtilis strain JD-014
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3178608..3189597

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FPL20_RS16750 (FPL20_GE03182)	trmD	3178835..3179566 (-)	732	WP_003232011.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
FPL20_RS16755 (FPL20_GE03183)	rimM	3179563..3180087 (-)	525	WP_003232013.1	ribosome maturation factor RimM	-
FPL20_RS16760 (FPL20_GE03184)	ylqD	3180092..3180478 (-)	387	WP_003232015.1	YlqD family protein	-
FPL20_RS16765 (FPL20_GE03185)	khpA	3180600..3180845 (-)	246	WP_003232017.1	KH domain-containing protein	-
FPL20_RS16770 (FPL20_GE03186)	rpsP	3180845..3181117 (-)	273	WP_003220815.1	30S ribosomal protein S16	-
FPL20_RS16775 (FPL20_GE03187)	ffh	3181223..3182563 (-)	1341	WP_003232020.1	signal recognition particle protein	-
FPL20_RS16780 (FPL20_GE03188)	srpM	3182577..3182909 (-)	333	WP_003238590.1	putative DNA-binding protein	-
FPL20_RS16785 (FPL20_GE03189)	sivC	3183086..3183571 (+)	486	WP_003245834.1	Ig-like domain-containing protein	-
FPL20_RS16790 (FPL20_GE03190)	pilA	3183608..3184597 (-)	990	WP_003232026.1	signal recognition particle-docking protein FtsY	Machinery gene
FPL20_RS16795 (FPL20_GE03191)	smc	3184617..3188177 (-)	3561	WP_003232028.1	chromosome segregation protein SMC	-
FPL20_RS16800 (FPL20_GE03192)	rncS	3188278..3189027 (-)	750	WP_003232030.1	ribonuclease III	-
FPL20_RS16805 (FPL20_GE03193)	acpP	3189167..3189400 (-)	234	WP_003154310.1	acyl carrier protein	-

Sequence

Protein

• Length: 329 a.a.
• Molecular weight: 36342.52 Da
• Isoelectric Point: 5.0164

>NTDB_id=344741 FPL20_RS16790 WP_003232026.1 3183608..3184597(-) (pilA) [Bacillus subtilis strain JD-014]
MSFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDEDFFEELEEVLISADVGFTTVMELIDELKKEV
KRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRLNVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFR
AGAIEQLEVWGERTGVPVIKQTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH
EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEFDPESYVYGLF
SDLVEKADD

Nucleotide

• Length: 990 bp

>NTDB_id=344741 FPL20_RS16790 WP_003232026.1 3183608..3184597(-) (pilA) [Bacillus subtilis strain JD-014]
ATGAGCTTTTTTAAAAAATTAAAAGAGAAAATCACAAAACAGACAGATTCCGTATCTGAAAAGTTTAAGGATGGCCTTGA
AAAAACAAGAAACTCCTTTCAAAACAAAGTGAATGATCTTGTATCCCGTTACCGTAAAGTGGATGAGGATTTCTTCGAAG
AGCTTGAAGAGGTTCTTATCAGCGCGGATGTCGGTTTTACAACCGTTATGGAATTAATAGATGAGCTGAAAAAAGAAGTC
AAACGCAGAAATATTCAAGATCCAAAGGAAGTCCAGTCAGTGATTTCTGAGAAACTGGTCGAGATTTATAACAGCGGAGA
TGAGCAAATTTCAGAACTGAACATCCAGGATGGGCGTTTAAACGTAATCCTTCTGGTAGGTGTAAACGGCGTCGGGAAAA
CAACAACGATCGGAAAGCTTGCTCATAAAATGAAACAAGAAGGAAAATCTGTTGTACTTGCCGCCGGAGACACTTTTAGA
GCGGGAGCCATTGAACAGCTGGAAGTATGGGGAGAGCGTACAGGAGTGCCTGTCATTAAGCAGACGGCAGGAAGCGATCC
GGCGGCTGTCATCTACGATGCTGTTCATGCTGCGAAAGCAAGAAATGCCGATGTATTAATTTGTGATACGGCAGGGCGTC
TCCAAAACAAAGTAAATCTCATGAAAGAGCTTGAAAAAGTAAAACGTGTTATCGAAAGAGAAGTTCCTGAAGCTCCGCAT
GAGGTGCTGCTTGCCCTTGATGCCACGACCGGCCAAAATGCAATGGCTCAGGCAAAAGAATTCTCTAAAGCAACAAATGT
TACCGGCATTGCTTTAACGAAGCTTGACGGTACGGCAAAAGGCGGTATCGTCCTTGCGATTCGCAACGAGCTTCACATCC
CGGTTAAACTAGTCGGTTTAGGAGAAAAAGTTGATGACCTTCAGGAATTTGATCCAGAATCCTATGTGTACGGACTCTTT
TCAGATTTAGTGGAAAAAGCCGACGATTAA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (121-320)

• SRP54-type protein, helical bundle domain (SRP54_N) (34-99)

3D structure

• AlphaFold DB: P51835

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	43.709	91.793	0.401