Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   GBR75_RS10590 Genome accession   NZ_CP045468
Coordinates   2152203..2152673 (+) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain SAW1     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2147203..2157673
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GBR75_RS10570 (GBR75_10790) coaW 2147513..2148316 (+) 804 WP_000862728.1 type II pantothenate kinase -
  GBR75_RS10575 (GBR75_10795) - 2148446..2149117 (-) 672 WP_000120545.1 DUF2750 domain-containing protein -
  GBR75_RS10580 (GBR75_10800) ldmS 2149515..2150708 (-) 1194 WP_000183707.1 L-aspartate--L-methionine ligase LdmS -
  GBR75_RS10585 (GBR75_10805) - 2150708..2151892 (-) 1185 WP_001291502.1 M20 family metallopeptidase -
  GBR75_RS10590 (GBR75_10810) luxS 2152203..2152673 (+) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  GBR75_RS10595 (GBR75_10815) - 2152825..2153175 (-) 351 WP_001024035.1 membrane protein -
  GBR75_RS10600 (GBR75_10820) - 2153189..2154490 (-) 1302 WP_001242305.1 pyrimidine-nucleoside phosphorylase -
  GBR75_RS10605 (GBR75_10825) deoC 2154770..2155432 (-) 663 WP_001083340.1 deoxyribose-phosphate aldolase -
  GBR75_RS10610 (GBR75_10830) deoD 2155746..2156456 (+) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  GBR75_RS10615 (GBR75_10835) - 2156577..2157020 (-) 444 WP_000070865.1 Dps family protein -
  GBR75_RS10620 (GBR75_10840) - 2157220..2157633 (-) 414 WP_001123298.1 thiol-disulfide oxidoreductase DCC family protein -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=344534 GBR75_RS10590 WP_000164421.1 2152203..2152673(+) (luxS) [Staphylococcus aureus strain SAW1]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=344534 GBR75_RS10590 WP_000164421.1 2152203..2152673(+) (luxS) [Staphylococcus aureus strain SAW1]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATATGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCTG
GATTGCATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTCGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65329

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404