Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   GBR75_RS06525 Genome accession   NZ_CP045468
Coordinates   1347057..1347680 (-) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain SAW1     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1342057..1352680
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GBR75_RS06500 (GBR75_06630) rpmG 1343633..1343782 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  GBR75_RS06505 (GBR75_06635) rpsN 1344236..1344505 (+) 270 WP_001085655.1 30S ribosomal protein S14 -
  GBR75_RS06510 (GBR75_06640) guaC 1344662..1345639 (+) 978 WP_000688126.1 GMP reductase -
  GBR75_RS06520 (GBR75_06650) - 1345661..1346677 (+) 1017 WP_170171895.1 CAP domain-containing protein -
  GBR75_RS06525 (GBR75_06655) dinR/lexA 1347057..1347680 (-) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  GBR75_RS06530 (GBR75_06660) sosA 1347823..1348056 (+) 234 WP_000499659.1 DNA damage-induced cell division inhibitor SosA -
  GBR75_RS06535 (GBR75_06665) - 1348192..1348431 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  GBR75_RS06540 (GBR75_06670) recP/tkt 1348552..1350540 (+) 1989 WP_000481447.1 transketolase Machinery gene
  GBR75_RS06545 (GBR75_06675) - 1350818..1351060 (+) 243 WP_000246909.1 YneF family protein -
  GBR75_RS06550 (GBR75_06680) - 1351047..1351145 (+) 99 WP_031845100.1 hypothetical protein -
  GBR75_RS06555 (GBR75_06685) - 1351239..1351706 (+) 468 WP_000966175.1 CcdC family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=344494 GBR75_RS06525 WP_001208755.1 1347057..1347680(-) (dinR/lexA) [Staphylococcus aureus strain SAW1]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=344494 GBR75_RS06525 WP_001208755.1 1347057..1347680(-) (dinR/lexA) [Staphylococcus aureus strain SAW1]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAGTATTT
TCCATTACCTGAACACTTAACATCGACACATAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657