Detailed information
Bioinformatically predicted
Overview
| Name | lrpC | Type | Machinery gene |
| Locus tag | GBR75_RS00275 | Genome accession | NZ_CP045468 |
| Coordinates | 62917..63330 (+) | Length | 137 a.a. |
| NCBI ID | WP_000998780.1 | Uniprot ID | C1PH97 |
| Organism | Staphylococcus aureus strain SAW1 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 57917..68330
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GBR75_RS00250 (GBR75_00255) | - | 57925..59211 (+) | 1287 | WP_000513494.1 | SIR2 family protein | - |
| GBR75_RS14165 | - | 59217..60146 (+) | 930 | WP_014363367.1 | helicase HerA domain-containing protein | - |
| GBR75_RS14170 | - | 60143..60904 (+) | 762 | WP_014363368.1 | ATP-binding protein | - |
| GBR75_RS00260 | - | 61065..61202 (+) | 138 | WP_021758025.1 | hypothetical protein | - |
| GBR75_RS00265 (GBR75_00265) | - | 61465..62076 (+) | 612 | WP_000856594.1 | hypothetical protein | - |
| GBR75_RS00270 (GBR75_00270) | - | 62409..62816 (-) | 408 | WP_000173401.1 | hypothetical protein | - |
| GBR75_RS00275 (GBR75_00275) | lrpC | 62917..63330 (+) | 414 | WP_000998780.1 | Lrp/AsnC family transcriptional regulator | Machinery gene |
| GBR75_RS00280 (GBR75_00285) | - | 63392..63865 (+) | 474 | WP_000455975.1 | GNAT family N-acetyltransferase | - |
| GBR75_RS00285 (GBR75_00290) | - | 63973..64959 (-) | 987 | WP_000662031.1 | tRNA dihydrouridine synthase | - |
| GBR75_RS00290 (GBR75_00295) | - | 65267..65470 (+) | 204 | WP_000389759.1 | DUF6007 family protein | - |
| GBR75_RS00295 (GBR75_00300) | - | 65519..65815 (+) | 297 | WP_000179901.1 | TfoX/Sxy family protein | - |
| GBR75_RS00300 (GBR75_00305) | - | 65877..67097 (-) | 1221 | WP_000130756.1 | MFS transporter | - |
| GBR75_RS00305 (GBR75_00310) | - | 67090..67641 (-) | 552 | WP_000627025.1 | flavodoxin family protein | - |
| GBR75_RS00310 (GBR75_00315) | - | 67754..68266 (+) | 513 | Protein_60 | LysR family transcriptional regulator | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 15971.29 Da Isoelectric Point: 4.6692
>NTDB_id=344455 GBR75_RS00275 WP_000998780.1 62917..63330(+) (lrpC) [Staphylococcus aureus strain SAW1]
MNDLINEKIINVLLNNSRITINELSKQVNLSAPAVRERVNKLEDQGIIKGYTINIDYKELGYDVEILIELTIKNNRYKDF
KEFISKQDNVEFCYRVSGEACFVFKVRLENMDEVETFVDTIQPYGQTKCQFIFSSVV
MNDLINEKIINVLLNNSRITINELSKQVNLSAPAVRERVNKLEDQGIIKGYTINIDYKELGYDVEILIELTIKNNRYKDF
KEFISKQDNVEFCYRVSGEACFVFKVRLENMDEVETFVDTIQPYGQTKCQFIFSSVV
Nucleotide
Download Length: 414 bp
>NTDB_id=344455 GBR75_RS00275 WP_000998780.1 62917..63330(+) (lrpC) [Staphylococcus aureus strain SAW1]
ATGAATGACTTAATAAATGAAAAAATAATCAATGTTTTGTTAAATAATAGTAGAATTACTATTAATGAATTAAGTAAACA
AGTGAACTTATCTGCTCCAGCTGTAAGAGAAAGGGTAAATAAACTTGAAGATCAAGGTATTATAAAAGGTTATACAATTA
ACATAGATTATAAGGAATTAGGTTACGATGTAGAAATATTAATTGAGTTAACTATAAAGAATAATAGATACAAAGATTTT
AAAGAATTTATTTCAAAACAAGATAATGTTGAGTTTTGTTATCGTGTATCAGGAGAGGCATGTTTTGTATTTAAGGTTCG
GTTGGAAAATATGGATGAAGTGGAAACATTTGTTGATACCATACAACCATATGGGCAGACAAAATGTCAGTTTATCTTTT
CATCAGTTGTCTAA
ATGAATGACTTAATAAATGAAAAAATAATCAATGTTTTGTTAAATAATAGTAGAATTACTATTAATGAATTAAGTAAACA
AGTGAACTTATCTGCTCCAGCTGTAAGAGAAAGGGTAAATAAACTTGAAGATCAAGGTATTATAAAAGGTTATACAATTA
ACATAGATTATAAGGAATTAGGTTACGATGTAGAAATATTAATTGAGTTAACTATAAAGAATAATAGATACAAAGATTTT
AAAGAATTTATTTCAAAACAAGATAATGTTGAGTTTTGTTATCGTGTATCAGGAGAGGCATGTTTTGTATTTAAGGTTCG
GTTGGAAAATATGGATGAAGTGGAAACATTTGTTGATACCATACAACCATATGGGCAGACAAAATGTCAGTTTATCTTTT
CATCAGTTGTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lrpC | Bacillus subtilis subsp. subtilis str. 168 |
43.284 |
97.81 |
0.423 |