Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   SA08028_RS10325 Genome accession   NZ_CP045435
Coordinates   2060778..2061596 (-) Length   272 a.a.
NCBI ID   WP_179976072.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 08-028     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2055778..2066596
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SA08028_RS10305 (SA08028_01585) - 2056871..2057848 (+) 978 WP_000379098.1 metal-dependent hydrolase -
  SA08028_RS10310 (SA08028_01586) - 2058109..2058945 (-) 837 WP_000886468.1 membrane protein -
  SA08028_RS10315 (SA08028_01587) - 2058954..2060471 (-) 1518 WP_000535834.1 ABC transporter ATP-binding protein -
  SA08028_RS10320 (SA08028_03087) - 2060486..2060800 (-) 315 WP_000435806.1 YfhH family protein -
  SA08028_RS10325 (SA08028_01588) recX 2060778..2061596 (-) 819 WP_179976072.1 recombination regulator RecX Regulator
  SA08028_RS10330 (SA08028_03088) sgtB 2061857..2062666 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  SA08028_RS10335 (SA08028_01590) - 2063005..2063520 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  SA08028_RS10340 (SA08028_03089) - 2063651..2063812 (-) 162 WP_001005407.1 SE1561 family protein -
  SA08028_RS10345 (SA08028_01591) yfkAB 2064036..2065187 (+) 1152 WP_001089622.1 radical SAM/CxCxxxxC motif protein YfkAB -
  SA08028_RS10350 (SA08028_01592) - 2065447..2065977 (-) 531 WP_000184383.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32227.04 Da        Isoelectric Point: 5.9211

>NTDB_id=344355 SA08028_RS10325 WP_179976072.1 2060778..2061596(-) (recX) [Staphylococcus aureus strain 08-028]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEIFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKVKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=344355 SA08028_RS10325 WP_179976072.1 2060778..2061596(-) (recX) [Staphylococcus aureus strain 08-028]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAACAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATATTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAAGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAGTTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.632

100

0.996

Multiple sequence alignment