Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   EWI30_RS15710 Genome accession   NZ_CP035738
Coordinates   3185400..3186026 (-) Length   208 a.a.
NCBI ID   WP_129996283.1    Uniprot ID   -
Organism   Enterobacter cloacae strain CZ-1     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3180400..3191026
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EWI30_RS15695 (EWI30_15695) helD 3180637..3182691 (-) 2055 WP_129996281.1 DNA helicase IV -
  EWI30_RS15700 (EWI30_15700) - 3182815..3183261 (+) 447 WP_023335159.1 YccF domain-containing protein -
  EWI30_RS15705 (EWI30_15705) yccS 3183281..3185443 (+) 2163 WP_129996282.1 YccS family putative transporter -
  EWI30_RS15710 (EWI30_15710) sxy/tfoX 3185400..3186026 (-) 627 WP_129996283.1 TfoX/Sxy family DNA transformation protein Regulator
  EWI30_RS15715 (EWI30_15715) sulA 3186243..3186752 (+) 510 WP_129997117.1 SOS-induced cell division inhibitor SulA -
  EWI30_RS15720 (EWI30_15720) ompA 3187107..3188162 (+) 1056 WP_129996284.1 porin OmpA -
  EWI30_RS15725 (EWI30_15725) matP 3188226..3188678 (-) 453 WP_008499929.1 macrodomain Ter protein MatP -
  EWI30_RS15730 (EWI30_15730) - 3188864..3190624 (+) 1761 WP_129996285.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23921.56 Da        Isoelectric Point: 9.5335

>NTDB_id=344162 EWI30_RS15710 WP_129996283.1 3185400..3186026(-) (sxy/tfoX) [Enterobacter cloacae strain CZ-1]
MKKISYERIYKSQEYLSPLGDIQHRALFGGYTLAVDDAVFAMVSEGELYLRACEESAKYCVKNAASFLTLMKRGRPVLLN
YFRVDDGLWQDRERLLQLSSFALRAARKERFQRHQRNRLKDLPNLTFQLEVLLFEAGITDEETLRTLGAKASWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=344162 EWI30_RS15710 WP_129996283.1 3185400..3186026(-) (sxy/tfoX) [Enterobacter cloacae strain CZ-1]
ATGAAAAAGATATCTTATGAACGGATCTATAAATCCCAGGAATATCTGTCTCCGCTGGGGGACATTCAACATCGTGCACT
GTTCGGTGGCTATACCCTGGCAGTGGATGATGCGGTCTTTGCCATGGTGTCAGAGGGAGAACTCTACCTTCGCGCCTGTG
AGGAAAGTGCGAAATACTGTGTGAAGAATGCCGCCTCGTTTTTGACACTCATGAAACGGGGGCGTCCGGTGCTTCTGAAC
TATTTTCGAGTGGATGACGGATTGTGGCAGGACAGGGAGCGTTTGCTCCAGCTCTCCTCGTTCGCACTGAGAGCGGCAAG
AAAAGAGCGCTTTCAGCGCCATCAACGAAACCGGCTTAAGGATCTCCCGAACCTGACGTTTCAGCTTGAGGTCTTGCTTT
TTGAAGCGGGTATTACCGATGAAGAAACACTTCGGACGCTTGGTGCGAAAGCGAGCTGGCTGAAGATGCGGGCAAAAAAT
AAAGCGCTCAGTATTAAAGTGCTTTTCGCGCTGGAAGGTGCCATTGAGGGACTTCATGAAGCGGCACTCCCGGCGGGAAT
ACGCCGGGAGCTGACGGAGTGGTTTAATGCGCTACCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567

Multiple sequence alignment