Detailed information NTG0344049

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: GC231_RS23550
• Genome accession: NZ_CP045213
• Coordinates: 4805777..4806760 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain EH41
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4800777..4811760

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GC231_RS23525 (GC231_23695)	-	4801930..4802037 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
GC231_RS23530 (GC231_23705)	-	4802409..4802516 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
GC231_RS23535 (GC231_23715)	-	4802892..4802999 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
GC231_RS23540 (GC231_23725)	yhjV	4803475..4804746 (+)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
GC231_RS23545 (GC231_23730)	dppF	4804776..4805780 (-)	1005	WP_000107018.1	dipeptide ABC transporter ATP-binding subunit DppF	-
GC231_RS23550 (GC231_23735)	amiE	4805777..4806760 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
GC231_RS23555 (GC231_23740)	dppC	4806771..4807673 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
GC231_RS23560 (GC231_23745)	dppB	4807683..4808702 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
GC231_RS23565 (GC231_23755)	dppA	4809010..4810617 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=344049 GC231_RS23550 WP_001196486.1 4805777..4806760(-) (amiE) [Escherichia coli strain EH41]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=344049 GC231_RS23550 WP_001196486.1 4805777..4806760(-) (amiE) [Escherichia coli strain EH41]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404