Detailed information
Overview
| Name | luxS | Type | Regulator |
| Locus tag | EPB57_RS20800 | Genome accession | NZ_CP035700 |
| Coordinates | 2645150..2645668 (+) | Length | 172 a.a. |
| NCBI ID | WP_017820391.1 | Uniprot ID | A0A2I3C9Z1 |
| Organism | Vibrio alginolyticus strain 2013V-1302 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2640150..2650668
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EPB57_RS20790 | gshA | 2642868..2644436 (+) | 1569 | WP_054574812.1 | glutamate--cysteine ligase | - |
| EPB57_RS20795 | - | 2644460..2645065 (+) | 606 | WP_195723072.1 | hypothetical protein | - |
| EPB57_RS20800 | luxS | 2645150..2645668 (+) | 519 | WP_017820391.1 | S-ribosylhomocysteine lyase | Regulator |
| EPB57_RS20805 | - | 2645737..2647017 (-) | 1281 | WP_005379948.1 | CNNM domain-containing protein | - |
| EPB57_RS20810 | - | 2647142..2647936 (-) | 795 | WP_005379950.1 | inner membrane protein YpjD | - |
| EPB57_RS20815 | ffh | 2648161..2649543 (+) | 1383 | WP_005385423.1 | signal recognition particle protein | - |
| EPB57_RS20820 | rpsP | 2649753..2650001 (+) | 249 | WP_005379962.1 | 30S ribosomal protein S16 | - |
| EPB57_RS20825 | rimM | 2650031..2650579 (+) | 549 | WP_154205047.1 | ribosome maturation factor RimM | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19074.83 Da Isoelectric Point: 4.8443
>NTDB_id=343934 EPB57_RS20800 WP_017820391.1 2645150..2645668(+) (luxS) [Vibrio alginolyticus strain 2013V-1302]
MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTAPNKDILSEKGIHTLEHLYAGFMRNHLNGDSVEIIDISP
MGCRTGFYMSLIGTPSEQQVADAWIAAMEDVLKVESQNKIPELNEYQCGTAAMHSLKEAQQIAKNILDAGVSVNKNDELA
LPESMLKELRID
MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTAPNKDILSEKGIHTLEHLYAGFMRNHLNGDSVEIIDISP
MGCRTGFYMSLIGTPSEQQVADAWIAAMEDVLKVESQNKIPELNEYQCGTAAMHSLKEAQQIAKNILDAGVSVNKNDELA
LPESMLKELRID
Nucleotide
Download Length: 519 bp
>NTDB_id=343934 EPB57_RS20800 WP_017820391.1 2645150..2645668(+) (luxS) [Vibrio alginolyticus strain 2013V-1302]
ATGCCTTTACTCGATAGTTTTACCGTGGACCACACTCGTATGAATGCACCGGCAGTGCGAGTGGCGAAAACCATGCAGAC
CCCAAAAGGGGATACGATTACTGTTTTCGACTTACGCTTTACTGCGCCAAACAAAGACATTCTTTCTGAAAAAGGTATTC
ACACCCTAGAGCACCTTTATGCAGGCTTTATGCGTAATCACCTAAACGGTGATTCTGTTGAGATCATCGATATTTCGCCT
ATGGGTTGCCGCACAGGTTTTTACATGAGTCTGATTGGCACACCATCAGAGCAGCAAGTCGCAGATGCTTGGATTGCAGC
AATGGAAGACGTGCTGAAGGTAGAAAGTCAGAATAAGATCCCTGAACTTAACGAATACCAATGCGGCACGGCAGCAATGC
ACTCTTTAAAAGAAGCACAACAGATCGCAAAGAACATTTTGGATGCTGGTGTTTCGGTGAACAAAAATGATGAACTTGCT
TTGCCTGAGTCGATGTTAAAAGAGTTGCGCATCGACTAG
ATGCCTTTACTCGATAGTTTTACCGTGGACCACACTCGTATGAATGCACCGGCAGTGCGAGTGGCGAAAACCATGCAGAC
CCCAAAAGGGGATACGATTACTGTTTTCGACTTACGCTTTACTGCGCCAAACAAAGACATTCTTTCTGAAAAAGGTATTC
ACACCCTAGAGCACCTTTATGCAGGCTTTATGCGTAATCACCTAAACGGTGATTCTGTTGAGATCATCGATATTTCGCCT
ATGGGTTGCCGCACAGGTTTTTACATGAGTCTGATTGGCACACCATCAGAGCAGCAAGTCGCAGATGCTTGGATTGCAGC
AATGGAAGACGTGCTGAAGGTAGAAAGTCAGAATAAGATCCCTGAACTTAACGAATACCAATGCGGCACGGCAGCAATGC
ACTCTTTAAAAGAAGCACAACAGATCGCAAAGAACATTTTGGATGCTGGTGTTTCGGTGAACAAAAATGATGAACTTGCT
TTGCCTGAGTCGATGTTAAAAGAGTTGCGCATCGACTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
87.135 |
99.419 |
0.866 |