Detailed information NTG0343879

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: ET948_RS06695
• Genome accession: NZ_CP035697
• Coordinates: 1441191..1444580 (-)
• Length: 1129 a.a.
• NCBI ID: WP_078926078.1
• Uniprot ID: -
• Organism: Vibrio cincinnatiensis strain 2409-02
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1436191..1449580

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ET948_RS06680	-	1436577..1437602 (-)	1026	WP_154115297.1	ABC transporter permease	-
ET948_RS06685	-	1437605..1438591 (-)	987	WP_078926076.1	ABC transporter permease	-
ET948_RS06690	-	1438751..1440421 (-)	1671	WP_154115298.1	ABC transporter substrate-binding protein	-
ET948_RS06695	chiS	1441191..1444580 (-)	3390	WP_078926078.1	response regulator	Regulator
ET948_RS06700	rsmC	1444779..1445804 (-)	1026	WP_154115299.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
ET948_RS06705	-	1445870..1446955 (-)	1086	WP_154115300.1	AI-2E family transporter	-
ET948_RS06710	hemL	1447269..1448561 (-)	1293	WP_154115301.1	glutamate-1-semialdehyde 2,1-aminomutase	-
ET948_RS06715	erpA	1448933..1449274 (+)	342	WP_078926152.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 128239.19 Da
• Isoelectric Point: 6.4363

>NTDB_id=343879 ET948_RS06695 WP_078926078.1 1441191..1444580(-) (chiS) [Vibrio cincinnatiensis strain 2409-02]
MFRFNRKQKFKRLQNTLMLAFLVLSLTPLTVTALFFLHSHSKDLQEQSTSHLLSVRDTKQQQVIDYLSAKESEVMGFVRS
ELAYASGGRFYGLVNAFQRLGDDIEQARLHAQQRYIPGSGDQIKTSVLPKSSSYVGSERYRLLHKRYHSAYLELLKRSDF
DDILLVDLNGNVVYSIYKYDNYGTNLLTGRYKSSNLGTTFQHLEQIVTENRKLNEDYTPVVLSDFIEEEGQQYAWMGAPI
IQQGYLHSYAMFRLPNNGITKLISENNSDSSKRTLLVGQDQRSRILAHNQVDIKTSTDVINMALNGGRAVGTYKNTLGEK
HIAAYAPIKVKELDWAIVVELPEKEAFARVRQLEKLFIFAMLTAIILVVIASHYLSNFITSPLLKLTWAAERVSAGDLDK
AIINTERQDEIGRLAVSFERMQRSIREKIQLIKSQNIELENNIQVIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIG
IAEALISGANGPINGAHKYQLDIIISSGQRLANLVDDLLDYHKMRYGHLDMELRAVNLASATQLVLALSSHLLGKKQIRI
INQVAENPIWVCADAQRLEQVLYNLIGNAIKYTSEGKIVISATQQEDHVRVQVVDTGQGIPAEQLEHIFEPLIQAGHDSS
RYRQGAGLGLSISRQLIGLMDGSLYVSSQPMVGTTFSFTLPLATSEQIEHAQQTQMAHFQIPELTELEKDEENHLPENPD
GPLLLVADDEPVNLRVLKSFLRLEGYRVKTVQEGNEVLSSVKEEQPELLLLDIMMPGMNGYQICEQLRQDYDHAQLPIIM
LTALNQSDDRLKGFEVGANDYLSKPFNKQELAARIQAHLTASKAEQRRIENARLQKELKQRAMVEASLLETQGRLLEQLD
SAPEAILCLREDNKIRFANESAARLFKRSQEQLKRSDAEELIAPKYLLVEQEHYCGNIDIYVDDIRQHISADILRLPEGS
GFKAMYIFNVGGNINAARIHNLETALEALSSYAFEGDKDKLQQLKELGGEFTRIAEKVAGENQSKQELMRSVLVEAMSSA
LDYWEKVTGQSKFTFAEQSGLWRVYLDRSTLQTRTLDKYLRIETLPKTPRWRTVLNSLDYILEHCKEQSPERTYIEVQRD
KLQKLLTTD

Nucleotide

• Length: 3390 bp

>NTDB_id=343879 ET948_RS06695 WP_078926078.1 1441191..1444580(-) (chiS) [Vibrio cincinnatiensis strain 2409-02]
ATGTTCAGGTTTAATCGAAAACAGAAATTTAAACGTCTGCAAAATACGTTAATGTTGGCATTTTTAGTGCTTAGCCTTAC
CCCTCTCACTGTGACGGCGCTGTTTTTCCTTCATTCTCACAGCAAAGATTTACAGGAACAGAGCACTTCTCATCTGCTAT
CTGTACGCGATACCAAGCAACAACAAGTGATTGACTACCTAAGCGCGAAAGAATCTGAAGTGATGGGCTTTGTTCGTTCA
GAACTGGCTTATGCAAGTGGTGGGCGATTCTATGGCTTAGTCAACGCCTTTCAACGGTTAGGTGATGATATTGAGCAAGC
CCGCCTACATGCCCAACAACGCTATATCCCCGGATCCGGCGATCAAATCAAAACCTCTGTACTGCCTAAATCAAGCAGTT
ATGTGGGCAGTGAACGTTATCGCCTACTGCACAAACGCTACCATTCCGCTTATCTTGAACTTCTGAAACGCTCGGATTTC
GACGACATTTTATTGGTCGACCTCAATGGTAACGTGGTCTATTCCATTTACAAATATGACAATTATGGTACTAACCTACT
CACTGGGCGCTATAAAAGTTCGAACCTAGGAACCACATTTCAGCATTTAGAGCAAATCGTCACAGAAAATCGGAAGCTCA
ATGAAGATTATACCCCCGTCGTGTTATCCGATTTTATTGAAGAAGAGGGGCAGCAATACGCTTGGATGGGTGCCCCCATT
ATTCAACAAGGCTACCTACACAGTTATGCTATGTTTCGGCTGCCAAATAATGGGATAACAAAACTCATTTCTGAAAATAA
CAGCGATTCCTCAAAACGCACATTGCTGGTCGGGCAGGATCAGCGATCACGAATCCTAGCTCATAACCAAGTCGATATAA
AAACCAGTACCGATGTCATCAATATGGCACTCAATGGCGGTCGAGCCGTTGGAACCTATAAAAATACCTTAGGCGAGAAA
CACATTGCCGCCTATGCCCCGATAAAAGTGAAAGAGTTAGACTGGGCTATAGTCGTAGAGCTACCAGAGAAAGAAGCCTT
TGCGCGAGTTCGTCAATTAGAGAAATTGTTTATTTTTGCAATGCTCACCGCCATAATCCTCGTCGTGATCGCCTCTCACT
ACCTATCTAACTTCATCACCTCTCCGTTATTGAAACTGACATGGGCGGCCGAACGGGTTTCAGCCGGAGATCTGGATAAA
GCCATCATTAATACTGAACGCCAAGATGAAATTGGCCGGTTGGCGGTGAGCTTTGAACGAATGCAACGTTCAATTCGAGA
AAAAATTCAACTGATCAAATCGCAAAACATTGAGTTAGAAAATAATATCCAAGTCATCCGTAAACAAAATGACGAATTAC
AGTTAGCCAATAAACTTAAAGATGAGTTTCTTGCTACCACTTCACATGAATTACGTACCCCACTACATGGCATGATTGGC
ATCGCGGAAGCATTGATTTCTGGGGCAAATGGTCCCATTAATGGCGCACATAAGTATCAATTAGATATTATCATCAGCAG
CGGGCAACGTTTGGCTAATTTGGTAGATGATCTATTGGATTACCATAAAATGCGTTATGGCCATTTAGATATGGAGTTAC
GTGCAGTCAACCTTGCAAGTGCAACTCAACTCGTCTTAGCGCTCTCTAGCCATCTATTGGGGAAAAAACAAATTCGAATT
ATTAATCAAGTCGCTGAAAACCCCATTTGGGTGTGTGCAGATGCTCAGCGTCTTGAACAAGTACTCTATAACCTTATCGG
TAATGCGATTAAATATACCTCTGAAGGAAAAATTGTCATTTCCGCCACTCAGCAAGAAGATCACGTTCGAGTGCAAGTCG
TTGATACGGGGCAAGGCATCCCCGCTGAGCAACTGGAACATATTTTTGAACCTCTTATTCAAGCAGGGCACGATAGTAGC
CGTTACCGTCAAGGCGCGGGATTAGGCCTATCCATTAGCCGCCAATTAATCGGATTAATGGATGGATCTTTATATGTCAG
CAGCCAACCAATGGTGGGGACCACCTTTAGCTTCACTCTCCCACTTGCGACATCAGAACAGATAGAGCATGCCCAACAAA
CCCAAATGGCACATTTCCAAATACCAGAGTTAACGGAACTAGAGAAAGATGAAGAAAATCATCTGCCAGAAAATCCTGAT
GGACCTCTTCTTCTGGTTGCCGATGATGAACCCGTCAATTTACGGGTTCTCAAAAGTTTTTTACGCTTAGAAGGTTATCG
GGTCAAAACCGTACAAGAAGGCAATGAAGTACTATCAAGTGTAAAAGAAGAACAGCCAGAACTATTACTGCTCGATATCA
TGATGCCAGGCATGAACGGTTATCAAATCTGCGAACAACTACGCCAAGATTACGACCACGCTCAACTGCCCATCATTATG
CTCACCGCACTAAACCAGAGTGATGACCGATTGAAAGGCTTTGAAGTCGGTGCTAATGATTACTTATCCAAACCTTTCAA
TAAACAAGAGTTAGCCGCTCGTATTCAAGCACATTTAACCGCAAGTAAAGCTGAACAACGACGAATAGAAAATGCTCGGT
TACAAAAAGAACTAAAACAACGCGCCATGGTAGAAGCCAGCCTGCTTGAAACCCAAGGGCGGCTGTTAGAACAACTAGAT
TCCGCTCCCGAGGCCATTTTATGCCTTCGAGAAGATAATAAAATTCGCTTTGCGAATGAGTCTGCCGCCCGACTATTTAA
GCGAAGCCAAGAGCAACTGAAACGCTCCGATGCTGAAGAACTGATTGCCCCCAAATATTTACTGGTCGAACAAGAACACT
ACTGTGGCAATATTGATATCTATGTCGATGATATCAGACAGCATATTTCGGCCGACATCCTTCGACTTCCTGAAGGATCT
GGCTTTAAAGCTATGTACATCTTTAATGTCGGAGGCAATATTAATGCAGCCAGAATCCATAACCTAGAAACGGCACTAGA
AGCTTTATCCAGTTATGCCTTTGAAGGAGATAAAGACAAACTTCAGCAATTAAAAGAATTAGGAGGAGAATTTACTCGTA
TTGCTGAAAAAGTAGCCGGAGAGAACCAATCAAAACAGGAATTAATGCGATCAGTATTGGTCGAAGCGATGAGTAGTGCT
CTTGATTACTGGGAAAAAGTGACAGGGCAAAGTAAATTCACTTTTGCTGAACAAAGTGGTTTATGGCGCGTCTATTTAGA
CCGTAGTACACTGCAAACCCGTACATTGGATAAATACCTGCGAATTGAAACTCTGCCGAAGACTCCTCGTTGGCGTACCG
TACTAAATTCACTGGATTATATTCTCGAACATTGCAAAGAGCAGTCCCCAGAGCGAACCTATATTGAAGTACAAAGAGAT
AAACTTCAAAAGCTACTCACCACAGACTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (725-836)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	81.754	100	0.818