Detailed information NTG0343829

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: GBG22_RS03900
• Genome accession: NZ_CP045206
• Coordinates: 811515..812720 (-)
• Length: 401 a.a.
• NCBI ID: WP_001161829.1
• Uniprot ID: A0A0H2Z2G4
• Organism: Escherichia coli strain DE17
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 806515..817720

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GBG22_RS03880 (GBG22_03930)	-	806577..807833 (+)	1257	WP_001259305.1	cytidylyltransferase domain-containing protein	-
GBG22_RS03885 (GBG22_03935)	neuC	807830..809005 (+)	1176	WP_000723250.1	UDP-N-acetylglucosamine 2-epimerase	-
GBG22_RS03890 (GBG22_03940)	-	808998..810146 (+)	1149	WP_068873750.1	DUF6716 putative glycosyltransferase	-
GBG22_RS03895 (GBG22_03945)	-	810136..811365 (+)	1230	WP_064572294.1	alpha-2,8-polysialyltransferase family protein	-
GBG22_RS03900 (GBG22_03950)	kpsS	811515..812720 (-)	1206	WP_001161829.1	capsule biosynthesis protein	Regulator
GBG22_RS03905 (GBG22_03955)	-	812755..814782 (-)	2028	WP_039267693.1	capsular polysaccharide biosynthesis protein	-
GBG22_RS03910 (GBG22_03960)	kdsB	814779..815519 (-)	741	WP_000030755.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
GBG22_RS03915 (GBG22_03965)	-	815529..817205 (-)	1677	WP_001331697.1	polysaccharide biosynthesis/export family protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47976.30 Da
• Isoelectric Point: 10.0024

>NTDB_id=343829 GBG22_RS03900 WP_001161829.1 811515..812720(-) (kpsS) [Escherichia coli strain DE17]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEDGVNAYSSLPRDPDFYRKLPDMPTPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLSERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNWVYYGGNTTNCQHNI
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=343829 GBG22_RS03900 WP_001161829.1 811515..812720(-) (kpsS) [Escherichia coli strain DE17]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGCCGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GTCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTTCCCGGATGGTTACGGGATCTCCATCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGCTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAGGAAGGATATTTACGCCCGCAATTTATTACCGTTGAAGAAGACGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTACGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGCTGGCATTACCGCCATGAGTTCCCTCGCTACCGCCACCATAA
ATCGTTTTCCCCCTGGTATGAAGCACGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTACCGAGGTTAATGAACGAGTTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTATATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCGCCGAAAGA
AAGTTATTTGGTGATCAAACATCATCCGATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGTTAAGTAAGG
AATATGGCTTAAGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACGCAGGTTAATTGGGTTTATTATGGGGGGAACACAACAAACTGCCAACATAATATA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

3D structure

• AlphaFold DB: A0A0H2Z2G4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	40.103	97.007	0.389