Detailed information NTG0343758

Bioinformatically predicted

Overview

• Name: cqsA
• Type: Regulator
• Locus tag: ET950_RS16015
• Genome accession: NZ_CP035691
• Coordinates: 141325..142524 (-)
• Length: 399 a.a.
• NCBI ID: WP_154124830.1
• Uniprot ID: -
• Organism: Grimontia hollisae strain 2013V-1029
• Function: induction of competence (predicted from homology) Competence regulation

Genomic Context

Location: 136325..147524

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ET950_RS19150	-	136560..137434 (-)	875	Protein_148	sigma 54-interacting transcriptional regulator	-
ET950_RS15995	-	137534..137707 (+)	174	WP_195714665.1	hypothetical protein	-
ET950_RS16000	-	138016..138402 (-)	387	WP_229333366.1	NADAR family protein	-
ET950_RS16005	-	138620..138742 (+)	123	WP_005504995.1	UxaA family hydrolase	-
ET950_RS16010	-	139182..141239 (+)	2058	WP_154124829.1	hybrid sensor histidine kinase/response regulator	-
ET950_RS16015	cqsA	141325..142524 (-)	1200	WP_154124830.1	alpha-hydroxyketone-type quorum-sensing autoinducer synthase	Regulator
ET950_RS16020	-	142940..143569 (-)	630	WP_040528898.1	class II aldolase/adducin family protein	-
ET950_RS16025	-	144145..144678 (-)	534	WP_154124831.1	NUDIX domain-containing protein	-
ET950_RS16030	yeiP	144854..145429 (+)	576	WP_005504987.1	elongation factor P-like protein YeiP	-
ET950_RS16035	yegS	145534..146469 (+)	936	WP_229333367.1	lipid kinase YegS	-
ET950_RS16040	trxC	146671..147099 (+)	429	WP_115660329.1	thioredoxin TrxC	-

Sequence

Protein

• Length: 399 a.a.
• Molecular weight: 44027.19 Da
• Isoelectric Point: 5.2769

>NTDB_id=343758 ET950_RS16015 WP_154124830.1 141325..142524(-) (cqsA) [Grimontia hollisae strain 2013V-1029]
METPSTPSTSIYKKKLPSFVEARLNSFLRDMTEPYENRRPLPVSSRPGEGAVIMQSNDYLALSFDDDIQTAHLNAIKTTN
ENVVMSAVFLQDAEHKPEFEKRLAEFIGMDGCVLSQSGWTANVGLLQTICEPGTHVYIDFFAHMSLWEGARIAGAQVIPF
MHNSVSNLKRQIKKHGPGIILVDSVYSTIGTVAPLPAICELAKELDCALVVDESHSLGTHGPGGSGLINEMEVRDQVDFV
TTSLAKAFAYRAGAVLGPDNLIIALPFVSFPAIFSSTVLPQEVARLEATLDVIQKSDDKRRRLFEISDVLRAGLKEIGFN
IRSESQIISLECGDEQNTEHVRDFLESKGVFGAVFCSPATPKNKAIIRFSLNADMSYREVDHVLTVCQAAYNHPDLRFY

Nucleotide

• Length: 1200 bp

>NTDB_id=343758 ET950_RS16015 WP_154124830.1 141325..142524(-) (cqsA) [Grimontia hollisae strain 2013V-1029]
ATGGAAACCCCATCTACTCCATCTACATCTATATATAAAAAAAAACTCCCTTCTTTTGTCGAGGCTCGTCTGAATTCGTT
TCTGCGCGATATGACAGAGCCTTATGAAAACCGACGGCCACTGCCTGTTAGCAGCCGACCCGGAGAGGGAGCCGTAATCA
TGCAGAGTAATGATTACCTCGCGCTTAGCTTTGATGACGATATTCAAACTGCACATTTGAATGCAATTAAAACGACGAAT
GAAAACGTCGTGATGTCAGCGGTATTCTTACAAGATGCTGAGCATAAGCCGGAGTTTGAAAAGCGCCTGGCTGAATTTAT
CGGCATGGATGGGTGTGTATTATCTCAATCTGGCTGGACGGCGAATGTCGGCTTGCTACAAACCATTTGTGAGCCCGGTA
CTCACGTCTATATTGATTTCTTTGCCCATATGTCATTGTGGGAAGGCGCTCGGATAGCAGGAGCTCAAGTTATCCCTTTC
ATGCACAACAGCGTTTCTAATCTCAAGCGACAAATAAAAAAACATGGTCCCGGCATCATTTTGGTGGATTCGGTTTACAG
CACCATCGGTACTGTTGCACCGCTCCCGGCGATCTGTGAATTGGCCAAAGAACTGGATTGTGCGCTGGTGGTTGATGAAT
CACATTCTTTGGGCACTCATGGTCCTGGCGGTTCGGGTCTGATTAACGAAATGGAGGTACGGGACCAGGTAGATTTTGTT
ACTACCAGCCTTGCTAAGGCATTTGCTTACCGGGCTGGGGCGGTATTGGGTCCGGACAATTTGATCATTGCATTACCGTT
TGTGTCTTTTCCGGCAATTTTCAGTTCTACTGTTTTGCCTCAGGAAGTTGCCCGGCTTGAGGCAACCCTTGATGTGATCC
AAAAAAGTGATGACAAGCGAAGGCGGCTTTTTGAAATATCTGATGTCTTGCGTGCGGGGTTGAAGGAGATTGGTTTTAAT
ATTCGCAGTGAATCCCAAATCATCTCCCTAGAGTGCGGTGATGAGCAGAATACGGAACATGTCCGGGACTTTCTGGAAAG
CAAGGGGGTGTTTGGGGCGGTATTTTGTTCACCGGCAACACCGAAGAACAAGGCCATTATCCGTTTCTCATTGAATGCAG
ATATGAGCTACCGGGAAGTGGATCATGTGCTGACTGTTTGTCAGGCAGCATACAACCACCCAGATCTTCGTTTCTATTAA

Domains

Predicted by InterproScan.

• Aminotransferase class I and II (Aminotran_1_2) (74-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cqsA	Vibrio cholerae strain A1552	52.85	96.742	0.511