Detailed information NTG0343757

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: ET950_RS14825
• Genome accession: NZ_CP035690
• Coordinates: 3228496..3231873 (-)
• Length: 1125 a.a.
• NCBI ID: WP_154124714.1
• Uniprot ID: -
• Organism: Grimontia hollisae strain 2013V-1029
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 3223496..3236873

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ET950_RS14810	-	3223994..3225022 (-)	1029	WP_005503959.1	ABC transporter permease	-
ET950_RS14815	-	3225025..3226011 (-)	987	WP_005503958.1	ABC transporter permease	-
ET950_RS14820	-	3226131..3227813 (-)	1683	WP_114995952.1	ABC transporter substrate-binding protein	-
ET950_RS14825	chiS	3228496..3231873 (-)	3378	WP_154124714.1	response regulator	Regulator
ET950_RS14830	rsmC	3232107..3233132 (-)	1026	WP_154124715.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
ET950_RS14835	-	3233214..3234296 (-)	1083	WP_154124716.1	AI-2E family transporter	-
ET950_RS14840	hemL	3234542..3235831 (-)	1290	WP_005503952.1	glutamate-1-semialdehyde 2,1-aminomutase	-
ET950_RS14845	erpA	3236064..3236405 (+)	342	WP_040528752.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1125 a.a.
• Molecular weight: 127083.02 Da
• Isoelectric Point: 5.6731

>NTDB_id=343757 ET950_RS14825 WP_154124714.1 3228496..3231873(-) (chiS) [Grimontia hollisae strain 2013V-1029]
MQKKQKFKRLKHTLMLAFLVLSITPLTLLAIFFLESHSSDLEQQSTTHLSFLRDNKKEQIISYFAARQSEVKSFSRSELA
TASGGRFYGLIAAFHQLGDTEKEARKAARERYAVSPPQNQAQTPQDANFIGSERYRLLHKRYDWAYKEHLKRSDFSDILL
VDIHGNVAYSALKDDVFAANLLSEQWRDTAIGKTFAELHDIANTPLVDDDDMPIVFSDFSQQENGEMVAWFAAPIIQQGY
LHSYVLFRLTNTTLDKMLKTSPQEKGYISTLLVGSDMIPRNIVSTERLTPINSNAIEAALSGLRDVGSFLSPNNERVLGA
YAPVQIQDKTWALILELPEEEAFARIYQLEKIFVVVMVIAILLVVIGSHLLSHSITAPLLKLTWAAEQVSAGDLDQKINN
TDREDEIGRLAVSFARMQRSVRDKLALIREQNKELEQNIQLIKQKNEELQQADRMKDDFLATTSHELRTPLHGMVGIAES
MLAGAEGPLPERQKHQLRMIINSGERLSNLVDDLLDYHKMRYGDVEISPQAVDTANAVRLVIELSSRLLGGKPVRIINQV
PIDLPLVRADGQRLEQVLYNLIGNAIKYTDEGKIIISATVLQGQLRIQVVDTGQGIPSDQLEYIFEPLTQARESNTQYRQ
GAGLGLSISRQLIDIMGGQLYVSSQPMVGTTFSFTLPLATEEDKAKTRLANNVHFAAPHAELEPVDYTQLPENPDGPLIL
VVDDEPVNLQILNNFLRLEGYRVKAVENGRQAIEFITMEKPALMLLDVMMPELSGYEVCTHLRERYSRAELPIIMLSALG
QVQDKVKGFDAGANDYLTKPFNKDELSARIRAYINASLTEQEREQNRALQKEIHFREQVEAGLREVQNRLLGMLDTASEG
IICVQEGGRITYANDACSEIFHLSAEQIERHQLDDFLAMALPEPEASRGHYSGQFRFKVEGDIVNIETDLITLPESSGLQ
MMLILNTGKKASSHRVHLLENAVSALADYAYDGDLEKLQQLRELGGEFTRMADRFSGNKPDKASILRETLVKVMTMTLSY
WSHSTGKTKFDLAEESGLWRVYLDRSTLQTRTLDKYLHVETVPKSPRWRTVISTIDFVLERCSDKSKERSELEILRERLQ
KLIAR

Nucleotide

• Length: 3378 bp

>NTDB_id=343757 ET950_RS14825 WP_154124714.1 3228496..3231873(-) (chiS) [Grimontia hollisae strain 2013V-1029]
ATGCAAAAAAAACAGAAATTCAAGCGATTGAAGCACACGCTGATGCTCGCTTTTCTGGTGCTGAGTATTACGCCTCTCAC
CCTGCTGGCGATCTTCTTTTTGGAATCTCACAGCAGCGATCTCGAACAACAGAGCACCACGCACCTTTCCTTCCTTCGTG
ACAATAAGAAAGAGCAAATCATCAGTTATTTTGCGGCGCGTCAGTCCGAAGTAAAATCCTTCAGCCGTTCTGAACTGGCT
ACTGCCAGCGGTGGCCGTTTTTATGGTTTGATCGCCGCTTTCCATCAGCTTGGCGATACGGAAAAAGAAGCACGCAAAGC
GGCACGTGAACGATACGCGGTTTCCCCACCCCAGAACCAGGCCCAAACACCCCAAGATGCCAACTTCATTGGTAGCGAAC
GCTATCGCCTGCTTCACAAACGCTATGACTGGGCCTACAAGGAGCACCTGAAGCGTTCGGATTTTTCTGACATCCTGCTT
GTCGATATCCACGGCAATGTGGCGTATTCCGCATTGAAAGATGATGTGTTTGCCGCCAATCTGTTGTCTGAACAATGGCG
TGATACCGCCATCGGCAAAACCTTTGCTGAACTCCATGATATTGCCAATACCCCGTTGGTTGATGACGACGATATGCCTA
TCGTTTTCAGCGATTTTTCCCAGCAGGAAAACGGCGAGATGGTGGCCTGGTTTGCTGCCCCCATCATCCAGCAGGGATAT
CTACACAGCTATGTGTTGTTCCGGCTGACAAATACAACACTGGATAAGATGCTAAAAACGTCCCCGCAGGAAAAGGGGTA
TATCAGCACCCTCCTGGTGGGAAGCGACATGATCCCGCGAAATATTGTCAGCACAGAAAGGCTCACCCCAATCAATAGCA
ACGCCATTGAAGCGGCGCTATCCGGGCTTCGTGATGTCGGCAGTTTCCTCAGCCCCAACAATGAGCGTGTACTCGGCGCT
TACGCACCGGTTCAGATACAGGATAAAACCTGGGCACTTATTCTCGAATTACCGGAAGAGGAGGCATTCGCCCGCATCTA
TCAGCTGGAAAAAATTTTTGTGGTCGTCATGGTGATCGCTATCTTACTGGTCGTCATCGGCTCACACCTTCTGTCTCATT
CTATTACCGCACCACTGTTGAAGCTCACCTGGGCTGCAGAGCAAGTCTCAGCAGGCGATCTGGACCAGAAGATAAACAAT
ACCGATCGTGAAGATGAAATTGGCCGGCTTGCGGTCAGCTTTGCCCGTATGCAGCGCTCAGTACGTGACAAACTGGCGCT
TATTCGCGAGCAAAATAAGGAGCTTGAGCAAAACATTCAGCTTATCAAGCAAAAGAATGAAGAGTTACAGCAAGCAGATC
GAATGAAGGATGACTTCCTTGCCACTACATCCCATGAGCTTCGCACACCGCTTCACGGCATGGTAGGGATTGCTGAATCG
ATGCTTGCCGGGGCTGAAGGGCCACTACCGGAGCGCCAGAAGCACCAGCTTCGTATGATCATCAACAGCGGTGAACGCCT
GTCTAACCTGGTAGATGATCTGCTCGATTACCATAAGATGCGCTATGGCGATGTGGAGATCTCCCCACAAGCCGTTGACA
CTGCCAATGCCGTACGTCTGGTGATTGAACTTTCCAGCCGCCTGTTGGGCGGAAAACCGGTACGCATCATCAACCAGGTT
CCCATTGACCTGCCACTTGTCAGGGCTGATGGACAGCGGCTCGAACAAGTGCTTTACAACCTGATAGGCAATGCCATTAA
GTATACTGACGAAGGGAAAATCATCATTTCCGCGACGGTACTGCAAGGGCAGTTACGGATCCAGGTGGTGGATACCGGTC
AGGGCATTCCTTCCGATCAGTTGGAATACATCTTTGAACCACTGACGCAGGCCAGAGAATCCAACACCCAGTATCGCCAG
GGCGCCGGGCTCGGCCTTTCAATCAGTCGTCAATTGATTGATATCATGGGCGGCCAGTTGTATGTCTCCAGCCAGCCTAT
GGTCGGCACAACATTCAGCTTCACCTTGCCCCTAGCCACCGAAGAAGATAAAGCAAAAACACGTCTTGCCAACAACGTGC
ACTTTGCTGCCCCACATGCCGAGCTTGAGCCGGTTGATTACACCCAGTTGCCGGAAAATCCGGACGGCCCCCTTATTCTG
GTTGTCGACGATGAACCAGTGAACCTGCAAATTCTCAACAACTTCCTGCGTCTGGAGGGGTATCGTGTCAAGGCCGTAGA
AAATGGTCGGCAAGCCATTGAGTTCATCACCATGGAAAAACCCGCACTGATGCTGCTTGACGTGATGATGCCAGAGCTCA
GCGGGTATGAAGTATGCACTCACCTTCGTGAGCGCTACAGTCGTGCTGAGTTGCCGATCATTATGCTCTCTGCACTGGGA
CAGGTTCAGGATAAAGTGAAGGGCTTTGATGCCGGTGCCAACGATTACCTGACTAAGCCGTTTAATAAAGATGAGCTTAG
TGCCCGCATCCGTGCCTATATTAATGCCTCCCTGACAGAACAGGAGCGGGAACAAAACCGTGCCCTGCAAAAAGAAATCC
ACTTCAGGGAGCAAGTGGAAGCGGGCCTTAGGGAGGTGCAAAACCGACTGCTCGGCATGCTGGATACCGCCTCGGAAGGC
ATTATCTGCGTACAGGAAGGTGGACGTATAACCTATGCCAACGATGCTTGCAGTGAGATTTTCCATTTAAGTGCCGAGCA
GATTGAGCGTCACCAACTGGATGACTTCCTTGCCATGGCACTACCTGAGCCAGAAGCAAGCCGGGGTCATTACAGTGGTC
AGTTCAGGTTCAAGGTAGAAGGCGACATTGTCAATATTGAGACCGATCTCATCACGTTGCCAGAGTCATCAGGCCTGCAG
ATGATGCTTATCCTGAACACCGGTAAAAAAGCCTCATCACACCGGGTACACCTGCTGGAGAATGCGGTATCAGCCCTCGC
CGATTATGCTTATGACGGCGATCTGGAGAAACTGCAACAACTCAGGGAACTGGGTGGGGAGTTTACCCGTATGGCAGACC
GTTTCTCAGGTAACAAGCCGGACAAAGCCAGTATACTGCGTGAAACCTTAGTAAAGGTCATGACCATGACACTGAGCTAC
TGGAGCCACTCAACCGGAAAGACCAAGTTTGATCTTGCAGAAGAAAGCGGCTTGTGGCGTGTGTATCTGGACCGAAGCAC
CCTACAAACCCGGACACTGGATAAATACCTGCACGTCGAGACAGTACCCAAATCCCCGCGCTGGCGCACGGTGATCAGCA
CGATTGACTTTGTATTGGAACGCTGCAGCGATAAGAGCAAAGAGCGAAGCGAACTCGAAATACTCAGGGAGCGTCTCCAA
AAACTGATTGCCCGCTAG

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (719-831)

• PAS domain (PAS_8) (869-925)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (570-679)

• His Kinase A (phospho-acceptor) domain (HisKA) (455-521)

• HAMP domain (HAMP) (370-422)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	56.394	100	0.564