Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | ET951_RS06850 | Genome accession | NZ_CP035682 |
| Coordinates | 1465890..1466408 (+) | Length | 172 a.a. |
| NCBI ID | WP_154113182.1 | Uniprot ID | - |
| Organism | Vibrio mimicus strain 2011V-1073 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1460890..1471408
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ET951_RS06830 | - | 1461108..1463585 (-) | 2478 | WP_192927869.1 | penicillin-binding protein 1A | - |
| ET951_RS06835 | pilM | 1463727..1464743 (+) | 1017 | WP_070381278.1 | type IV pilus assembly protein PilM | Machinery gene |
| ET951_RS06840 | pilN | 1464733..1465317 (+) | 585 | WP_000903041.1 | PilN domain-containing protein | Machinery gene |
| ET951_RS06845 | pilO | 1465310..1465900 (+) | 591 | WP_000135849.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ET951_RS06850 | pilP | 1465890..1466408 (+) | 519 | WP_154113182.1 | pilus assembly protein PilP | Machinery gene |
| ET951_RS06855 | pilQ | 1466434..1468149 (+) | 1716 | WP_187377498.1 | type IV pilus secretin PilQ | Machinery gene |
| ET951_RS06860 | aroK | 1468336..1468860 (+) | 525 | WP_000818614.1 | shikimate kinase AroK | - |
| ET951_RS06865 | aroB | 1468888..1469973 (+) | 1086 | WP_192927868.1 | 3-dehydroquinate synthase | - |
| ET951_RS06870 | - | 1470027..1471391 (+) | 1365 | Protein_1272 | AAA family ATPase | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 18984.89 Da Isoelectric Point: 9.8335
>NTDB_id=343603 ET951_RS06850 WP_154113182.1 1465890..1466408(+) (pilP) [Vibrio mimicus strain 2011V-1073]
MKNNPAWLSLVTLFLLVGCKANQEDLAGYVAQVEREARKEVTKLKPILEFEVTAYQQHSGREPFVLPKEALVQNQPVAKS
DCWQPSPRAKNGPLERYPLSQLRLKGVMSSGGSISALVQTPAGNVVKVKAGQYVGNNNGKITRVDDNYLLINETLPDGLG
CWNQRNVKLALK
MKNNPAWLSLVTLFLLVGCKANQEDLAGYVAQVEREARKEVTKLKPILEFEVTAYQQHSGREPFVLPKEALVQNQPVAKS
DCWQPSPRAKNGPLERYPLSQLRLKGVMSSGGSISALVQTPAGNVVKVKAGQYVGNNNGKITRVDDNYLLINETLPDGLG
CWNQRNVKLALK
Nucleotide
Download Length: 519 bp
>NTDB_id=343603 ET951_RS06850 WP_154113182.1 1465890..1466408(+) (pilP) [Vibrio mimicus strain 2011V-1073]
ATGAAAAATAACCCTGCATGGTTGTCTCTCGTCACCTTGTTTCTGTTGGTGGGGTGTAAAGCTAATCAAGAAGATCTGGC
CGGGTATGTCGCACAAGTAGAGCGTGAAGCACGCAAGGAAGTCACAAAACTCAAACCGATTCTGGAATTTGAAGTGACGG
CCTATCAACAGCACTCAGGACGTGAGCCATTTGTGTTGCCTAAAGAGGCTTTGGTGCAAAACCAACCTGTTGCGAAATCA
GACTGCTGGCAGCCTTCTCCACGAGCTAAAAATGGCCCATTAGAGCGTTATCCATTAAGTCAATTGCGCCTGAAAGGGGT
AATGAGCAGTGGCGGCTCCATCTCGGCGTTAGTGCAAACCCCCGCGGGTAATGTCGTCAAAGTTAAAGCAGGACAGTACG
TGGGTAACAATAACGGAAAAATTACACGAGTGGATGATAACTATTTATTAATTAATGAAACTTTGCCTGATGGCTTAGGG
TGTTGGAATCAGCGTAACGTCAAGCTGGCTTTAAAATAA
ATGAAAAATAACCCTGCATGGTTGTCTCTCGTCACCTTGTTTCTGTTGGTGGGGTGTAAAGCTAATCAAGAAGATCTGGC
CGGGTATGTCGCACAAGTAGAGCGTGAAGCACGCAAGGAAGTCACAAAACTCAAACCGATTCTGGAATTTGAAGTGACGG
CCTATCAACAGCACTCAGGACGTGAGCCATTTGTGTTGCCTAAAGAGGCTTTGGTGCAAAACCAACCTGTTGCGAAATCA
GACTGCTGGCAGCCTTCTCCACGAGCTAAAAATGGCCCATTAGAGCGTTATCCATTAAGTCAATTGCGCCTGAAAGGGGT
AATGAGCAGTGGCGGCTCCATCTCGGCGTTAGTGCAAACCCCCGCGGGTAATGTCGTCAAAGTTAAAGCAGGACAGTACG
TGGGTAACAATAACGGAAAAATTACACGAGTGGATGATAACTATTTATTAATTAATGAAACTTTGCCTGATGGCTTAGGG
TGTTGGAATCAGCGTAACGTCAAGCTGGCTTTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Vibrio cholerae strain A1552 |
87.791 |
100 |
0.878 |
| pilP | Vibrio campbellii strain DS40M4 |
56.213 |
98.256 |
0.552 |