Detailed information NTG0343582

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: ET951_RS02585
• Genome accession: NZ_CP035682
• Coordinates: 575158..578691 (+)
• Length: 1177 a.a.
• NCBI ID: WP_192927781.1
• Uniprot ID: -
• Organism: Vibrio mimicus strain 2011V-1073
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 570158..583691

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ET951_RS02560	erpA	570752..571093 (-)	342	WP_000005742.1	iron-sulfur cluster insertion protein ErpA	-
ET951_RS02565	hemL	571377..572675 (+)	1299	WP_000167253.1	glutamate-1-semialdehyde 2,1-aminomutase	-
ET951_RS02570	-	572721..572876 (-)	156	WP_000187948.1	hypothetical protein	-
ET951_RS02575	-	572913..573998 (+)	1086	WP_001290824.1	AI-2E family transporter	-
ET951_RS02580	rsmC	574072..575094 (+)	1023	WP_154112899.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
ET951_RS02585	chiS	575158..578691 (+)	3534	WP_192927781.1	two-component system sensor histidine kinase ChiS	Regulator
ET951_RS02590	-	579372..581042 (+)	1671	WP_000880696.1	ABC transporter substrate-binding protein	-
ET951_RS02595	-	581212..582198 (+)	987	WP_000540341.1	ABC transporter permease	-
ET951_RS02600	-	582201..583226 (+)	1026	WP_154112900.1	ABC transporter permease	-

Sequence

Protein

• Length: 1177 a.a.
• Molecular weight: 133247.32 Da
• Isoelectric Point: 6.5830

>NTDB_id=343582 ET951_RS02585 WP_192927781.1 575158..578691(+) (chiS) [Vibrio mimicus strain 2011V-1073]
MRLCPRFRLDLLVKVKKLVNFVTLGFSYQSPTHAWRSPQSFTKSNALIMFRFYRKQKFKRLQNTLMAAFLALSIIPLTIT
ALFFLHSHSKDLEEQSTSYLVSVRDTKQQQVIDYMMAKESEVMGFVRSELAYASGGRFYGLVNAFQRLDVSIEAAREHAQ
QRYIPGSGDQIKTSVLPQSSSYVGSERYRLLHKRYHWAYLELLKRSDFDDILLVDIEGNVVYSIYKYDNFGTNLLTGKYK
DSSLGSTFKRLEQTVNEQRKTNEDFTPVVISDFVQEDGKQYAWLGAPIIQQGYLHSYAMFRLPSNAITKLIADGSSNPSM
QTILVGQDHRSRTLTSAEVAVEKSKEVVDLALSGKRSVGTYTNTDDEEIIAAYAPINLKSIHWALVVELPEKEAFARVRQ
LEKLFVFAMLTAIVLVVIASHYLSNFITSPLLKLTWAAERVSAGDLDEAMINTERKDEIGRLAVSFERMQRSIREKISLI
KSQNKELENNLLIIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIGIAEALVSGANGPLTAAHKYQLDIIISSGQRLA
TLVDDLLDYHKMRYGALDIQKGAVDLSSATRLVLELSNHLLGKKTLRIINQVSEQPVWVSADPQRLEQVLYNLIGNAIKY
TSEGKIVISATYIDDKVRVQVVDTGQGIPAEQLEQIFEPLIQAGRDASRYRQGAGLGLSISRQLIELMNGTLYVSSQPMV
GTTFSFTLPLATQEEIDQARLTELPHFQAPEILDTELPEQSTLPENEHGPLLLVADDEPVNLRVLDSFLRLEGYRVHTAQ
DGHEVLEAIQREKPELLLLDIMMPGMSGYQVCEKLRQTYDHAELPIIMLTALNQSDDRVRGFEAGANDYLSKPFNKQELA
ARIVAHLTASKAELRRIENAQLQKELKHRAMVEASLLETQGRLLEQLESAPEAILCVKEGNKVRFANEAAARLFRRTPEQ
LKRSNAEELIAPKYLNIEQEHYCGNIDVYVDDVRQHLSADVLRLPEGSGLQAMYIFNVGGSINAARIFNLETAVEALSSY
AFEGDKDKLQKLKELGGEFTRIADKASGEYQSKQDLMRAVLVEAMTSALNYWENVSGQSKFTFAEQSGLWRVYLDRSTLQ
TRTLDKYLRIETLPKTPRWRTVLNSLDYILEHCKEPGPDRTHIEMQRDKLQKLLTSE

Nucleotide

• Length: 3534 bp

>NTDB_id=343582 ET951_RS02585 WP_192927781.1 575158..578691(+) (chiS) [Vibrio mimicus strain 2011V-1073]
TTGCGTCTATGCCCACGCTTTAGATTGGACTTACTTGTCAAAGTAAAAAAACTCGTTAATTTCGTTACTTTAGGTTTTTC
TTATCAATCACCCACTCATGCTTGGCGATCGCCACAGAGTTTCACCAAAAGTAATGCCTTAATTATGTTTAGGTTCTATC
GAAAACAAAAATTCAAGCGCCTGCAAAATACGCTAATGGCGGCATTTCTGGCACTCAGTATTATTCCATTAACCATCACA
GCGCTGTTTTTCCTCCATTCACACAGTAAAGATTTGGAAGAGCAAAGCACCTCTTACCTTGTCTCAGTGCGCGATACCAA
ACAGCAGCAAGTGATTGATTATATGATGGCCAAAGAGTCGGAAGTGATGGGCTTTGTCCGTTCTGAACTCGCTTATGCCA
GTGGTGGTCGCTTTTATGGCTTAGTGAACGCCTTCCAGCGCTTAGATGTCAGCATTGAAGCAGCACGCGAGCATGCCCAA
CAGCGCTATATACCGGGCTCAGGTGATCAAATAAAAACCTCAGTACTGCCACAATCAAGTAGCTATGTGGGCAGTGAACG
CTACCGGCTCCTGCACAAACGTTATCATTGGGCTTATTTAGAACTACTGAAACGCTCGGATTTTGACGACATATTACTGG
TAGATATTGAAGGCAACGTTGTTTACTCCATCTATAAATATGACAACTTCGGAACCAACTTATTAACGGGAAAATATAAA
GATTCCAGTCTGGGGAGTACCTTTAAACGCCTCGAGCAAACCGTTAATGAACAGCGCAAGACTAACGAAGATTTCACACC
TGTGGTTATCTCTGACTTTGTGCAAGAAGATGGAAAACAATACGCATGGCTCGGTGCACCCATCATTCAACAAGGGTATT
TGCACAGTTACGCTATGTTCCGCCTGCCAAGTAATGCGATCACTAAGCTGATCGCGGATGGCAGTAGCAATCCATCGATG
CAAACCATTTTGGTTGGCCAAGATCATCGTTCAAGAACCTTAACTTCCGCTGAAGTTGCAGTTGAAAAAAGCAAAGAAGT
GGTCGATTTAGCCTTGTCTGGCAAACGTTCTGTCGGCACTTACACCAATACCGATGATGAAGAGATCATTGCTGCGTACG
CCCCAATTAATCTGAAAAGTATTCATTGGGCGTTAGTAGTAGAATTACCAGAAAAAGAAGCCTTTGCTCGCGTACGTCAG
TTAGAAAAGCTCTTCGTCTTCGCGATGCTGACGGCTATTGTCTTAGTGGTCATCGCTTCCCATTACCTATCCAACTTCAT
TACTTCCCCACTGTTGAAACTAACTTGGGCAGCAGAACGAGTCTCGGCAGGCGATCTTGATGAAGCAATGATCAATACCG
AGCGTAAAGATGAAATTGGCCGTTTGGCAGTCAGCTTTGAACGAATGCAGCGCTCCATACGCGAAAAAATATCGCTGATC
AAATCGCAAAACAAAGAGCTAGAAAACAATCTCCTGATCATTCGTAAACAAAACGATGAATTGCAGCTCGCGAACAAACT
CAAAGATGAATTCCTCGCTACGACATCGCACGAGTTACGCACCCCCCTGCATGGCATGATCGGGATTGCTGAAGCGTTAG
TCTCTGGTGCCAATGGCCCACTGACCGCCGCTCATAAGTATCAGCTCGACATCATCATTAGTAGTGGACAACGCTTAGCT
ACCTTGGTTGATGACCTGCTGGACTACCACAAAATGCGCTATGGTGCGCTGGATATCCAAAAAGGTGCCGTCGATTTATC
GAGTGCAACCCGCTTGGTGCTTGAGCTTTCAAACCATTTGCTTGGCAAGAAAACGCTGCGCATCATTAATCAAGTCTCAG
AGCAACCTGTCTGGGTATCGGCCGATCCACAACGCTTAGAACAAGTTCTGTATAACCTGATCGGTAACGCGATCAAGTAC
ACCTCCGAAGGTAAGATTGTTATCTCAGCAACCTATATTGACGATAAAGTCAGGGTACAAGTCGTGGATACAGGACAAGG
TATTCCTGCTGAGCAGCTTGAACAGATCTTTGAACCTTTAATCCAAGCAGGGCGCGATGCCAGCCGCTATCGTCAAGGTG
CGGGACTCGGACTTTCAATTAGTCGTCAGTTAATTGAGCTAATGAACGGCACTCTTTATGTAAGTAGCCAGCCTATGGTT
GGTACGACATTTAGCTTTACTCTGCCGTTGGCCACACAAGAGGAAATTGACCAAGCTCGTTTGACTGAGTTACCTCATTT
CCAAGCACCGGAAATTTTGGATACCGAACTGCCAGAGCAAAGTACACTGCCTGAAAATGAGCATGGCCCACTTCTGCTTG
TCGCCGATGATGAACCAGTAAACCTCAGAGTATTGGACAGTTTTTTACGTCTCGAAGGTTATCGCGTTCATACTGCTCAA
GATGGCCATGAAGTGCTTGAAGCCATTCAGCGTGAGAAACCGGAACTCTTGTTACTGGACATCATGATGCCGGGCATGAG
TGGCTATCAAGTCTGTGAAAAACTAAGACAGACTTACGATCATGCTGAACTCCCCATCATCATGTTGACCGCTCTTAACC
AATCTGATGACCGAGTACGTGGATTTGAAGCTGGGGCGAATGACTATTTGTCCAAGCCTTTTAATAAGCAGGAATTGGCT
GCGCGTATCGTTGCCCATCTCACTGCCAGCAAAGCTGAACTAAGGCGCATTGAAAATGCTCAGCTCCAAAAAGAGCTGAA
GCATCGTGCCATGGTAGAAGCCAGCTTACTCGAAACGCAAGGACGTTTGTTAGAGCAATTAGAATCGGCACCAGAAGCGA
TTCTATGCGTCAAAGAAGGCAACAAAGTACGCTTTGCTAACGAAGCAGCAGCCCGTTTATTTAGACGCACACCAGAACAG
CTCAAACGCTCGAATGCTGAAGAGTTGATTGCACCTAAATACCTGAATATTGAACAAGAACATTACTGTGGCAACATCGA
CGTTTACGTGGACGATGTACGACAGCATCTGTCGGCGGATGTCCTGCGTTTACCGGAAGGCTCTGGATTACAAGCCATGT
ACATTTTCAATGTGGGTGGCAGCATTAACGCAGCGCGCATTTTCAATCTTGAAACCGCTGTAGAGGCGCTCTCTAGTTAC
GCTTTCGAGGGTGACAAAGATAAACTGCAGAAGCTCAAAGAACTCGGTGGAGAGTTTACTCGCATAGCTGATAAAGCATC
AGGAGAATATCAATCCAAACAAGATTTGATGCGTGCTGTATTGGTGGAAGCCATGACCAGCGCCCTCAATTATTGGGAAA
ATGTTTCAGGGCAAAGCAAGTTCACGTTTGCAGAACAAAGTGGCCTGTGGCGCGTTTATTTAGACCGTAGCACCTTACAA
ACTCGCACCTTAGACAAGTATTTACGGATTGAGACACTGCCTAAAACACCCCGCTGGAGAACTGTTCTAAACTCGCTTGA
TTACATTCTTGAGCACTGTAAAGAGCCAGGACCCGATCGTACTCATATCGAAATGCAACGCGATAAACTGCAAAAGCTAC
TGACCAGTGAGTAA

Domains

Predicted by InterproScan.

• PAS domain (PAS_8) (927-961)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (622-731)

• Response regulator receiver domain (Response_reg) (773-883)

• His Kinase A (phospho-acceptor) domain (HisKA) (508-573)

• HAMP domain (HAMP) (423-475)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	96.007	100	0.96