Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   EVU95_RS07390 Genome accession   NZ_CP035643
Coordinates   1538030..1539076 (-) Length   348 a.a.
NCBI ID   WP_002486322.1    Uniprot ID   -
Organism   Staphylococcus epidermidis strain E73     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1533030..1544076
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EVU95_RS07360 (EVU95_07635) - 1533414..1534655 (-) 1242 WP_002457094.1 aminopeptidase -
  EVU95_RS07365 (EVU95_07640) - 1534657..1534872 (-) 216 WP_001830421.1 DUF1128 domain-containing protein -
  EVU95_RS07370 (EVU95_07645) - 1535013..1535477 (+) 465 WP_001830437.1 low molecular weight protein-tyrosine-phosphatase -
  EVU95_RS07375 (EVU95_07650) - 1535485..1535769 (+) 285 WP_001830401.1 YtxH domain-containing protein -
  EVU95_RS07380 (EVU95_07655) - 1536176..1537354 (+) 1179 WP_001830411.1 YihY/virulence factor BrkB family protein -
  EVU95_RS07385 (EVU95_07660) vraR 1537411..1538040 (-) 630 WP_001830439.1 two-component system response regulator VraR Regulator
  EVU95_RS07390 (EVU95_07665) vraS 1538030..1539076 (-) 1047 WP_002486322.1 sensor histidine kinase Regulator
  EVU95_RS07395 (EVU95_07670) liaF 1539073..1539774 (-) 702 WP_002457093.1 cell wall-active antibiotics response protein LiaF -
  EVU95_RS07400 (EVU95_07675) - 1539789..1540175 (-) 387 WP_001830382.1 hypothetical protein -
  EVU95_RS07405 (EVU95_07680) map 1540333..1541088 (-) 756 WP_002457092.1 type I methionyl aminopeptidase -
  EVU95_RS07410 (EVU95_07685) - 1541262..1542248 (+) 987 WP_002457091.1 aromatic acid exporter family protein -
  EVU95_RS07415 (EVU95_07690) - 1542399..1542935 (-) 537 WP_001830372.1 hypothetical protein -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 40039.46 Da        Isoelectric Point: 5.8512

>NTDB_id=343315 EVU95_RS07390 WP_002486322.1 1538030..1539076(-) (vraS) [Staphylococcus epidermidis strain E73]
MNHYIRAIGSMLILVYSMLIAFLFIDKVFVSIIFFQGMFYTQIFGIPVFLFLNLLIVLLCIIVGSVLAYKINQQNDWIIS
QIERSIEGQTVGINDQNIELYTETIDIYHTLVPLNQELHRLRMKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKESKLEPPLNQQIPILEKMVQDSQLEMRALLLHLRPIGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFEVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNQEDYLLLRIQDNGKGFNVDEKFEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEENSSGD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=343315 EVU95_RS07390 WP_002486322.1 1538030..1539076(-) (vraS) [Staphylococcus epidermidis strain E73]
ATGAATCACTACATAAGAGCTATAGGCTCAATGCTTATATTAGTATATAGTATGCTTATTGCTTTTTTATTTATTGATAA
AGTGTTTGTAAGTATTATCTTTTTTCAGGGGATGTTTTATACACAAATATTTGGAATACCTGTTTTTCTATTTTTAAATT
TATTAATTGTTCTTTTATGTATTATAGTTGGATCTGTTTTAGCTTATAAAATTAATCAACAAAATGATTGGATTATTTCA
CAAATAGAAAGATCAATAGAAGGACAAACAGTAGGTATCAATGATCAAAATATCGAATTATATACAGAAACGATAGATAT
TTATCATACACTAGTTCCATTAAATCAAGAATTACATCGACTTAGAATGAAGACTCAAAATTTAACTAATGAAAACTACA
ATATTAATGATGTAAAAGTCAAAAAGATTATCGAAGATGAGCGACAACGACTTGCCAGGGAATTACATGATTCTGTTAGT
CAACAATTATTTGCTGCGAGCATGATGCTATCGGCGATAAAAGAGTCGAAATTAGAACCACCTTTAAATCAACAGATACC
AATTCTTGAAAAAATGGTTCAAGACTCACAACTTGAAATGAGAGCTTTGTTATTACATTTAAGACCGATAGGTTTAAAAG
ATAAGTCTTTAGGTGAAGGAATTAAAGATTTAGTCATCGATTTACAAAAGAAAGTACCAATGAAAGTTGTGCATGAAATT
CAAGATTTTGAAGTGCCAAAAGGCATTGAAGATCACTTGTTCAGAATTACACAAGAAGCTATTTCAAATACATTGAGACA
TTCAAATGGTACAAAAGTAACTGTGGAATTATTTAATCAAGAGGATTATCTTTTACTAAGAATTCAAGATAATGGAAAAG
GATTTAATGTAGATGAAAAATTTGAACAAAGTTATGGTTTGAAAAATATGCGAGAACGAGCGTTAGAAATTGGTGCGACG
TTTCATATTGTATCTTTACCTGATTCAGGTACACGAATTGAAGTTAAGGCACCATTGAATAAGGAGGAGAATTCAAGTGG
CGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

92.733

98.851

0.917


Multiple sequence alignment