Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   F8M43_RS15755 Genome accession   NZ_CP044498
Coordinates   3011134..3011829 (-) Length   231 a.a.
NCBI ID   WP_003229133.1    Uniprot ID   -
Organism   Bacillus subtilis strain ms-2     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3006134..3016829
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F8M43_RS15735 yttA 3006561..3007307 (+) 747 WP_014480618.1 LMBR1 domain-containing protein -
  F8M43_RS15740 bceB 3007344..3009284 (-) 1941 WP_038427854.1 bacitracin ABC transporter permease BceB -
  F8M43_RS15745 bceA 3009274..3010035 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  F8M43_RS15750 bceS 3010137..3011141 (-) 1005 WP_038427855.1 two-component sensor histidine kinase BceS -
  F8M43_RS15755 braR 3011134..3011829 (-) 696 WP_003229133.1 two-component response regulator BceR Regulator
  F8M43_RS15760 ytrF 3011926..3013236 (-) 1311 WP_038427856.1 ABC transporter permease YtrF -
  F8M43_RS15765 ytrE 3013226..3013921 (-) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  F8M43_RS15770 ytrD 3013936..3014913 (-) 978 WP_029726913.1 ABC transporter permease YtrD -
  F8M43_RS15775 ytrC 3014943..3015929 (-) 987 WP_029726914.1 ABC transporter permease YtrC -
  F8M43_RS15780 ytrB 3015923..3016801 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26865.76 Da        Isoelectric Point: 5.6471

>NTDB_id=343256 F8M43_RS15755 WP_003229133.1 3011134..3011829(-) (braR) [Bacillus subtilis strain ms-2]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNNKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=343256 F8M43_RS15755 WP_003229133.1 3011134..3011829(-) (braR) [Bacillus subtilis strain ms-2]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTGC
AGCTGCCTAAATTTGACGGTTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCTATGCAGCTCGGGGCAGATGACTTTATTCAAAAACCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATAACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTTTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377