Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   F8M43_RS00220 Genome accession   NZ_CP044498
Coordinates   41170..41997 (+) Length   275 a.a.
NCBI ID   WP_003243571.1    Uniprot ID   P37541
Organism   Bacillus subtilis strain ms-2     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 36170..46997
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F8M43_RS00195 efpO 37233..38675 (+) 1443 WP_029726395.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  F8M43_RS00200 tmk 38672..39310 (+) 639 WP_003243137.1 dTMP kinase -
  F8M43_RS00205 darA 39384..39713 (+) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  F8M43_RS00210 yaaR 39726..40166 (+) 441 WP_009966249.1 YaaR family protein -
  F8M43_RS00215 holB 40178..41167 (+) 990 WP_003244417.1 DNA polymerase III subunit delta' -
  F8M43_RS00220 yaaT 41170..41997 (+) 828 WP_003243571.1 competence/sporulation regulator complex protein RicT Regulator
  F8M43_RS00225 yabA 42012..42371 (+) 360 WP_003218308.1 replication initiation-control protein YabA -
  F8M43_RS00230 trmNF 42430..43173 (+) 744 WP_003244526.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  F8M43_RS00235 yazA 43160..43459 (+) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  F8M43_RS00240 rsmI 43434..44312 (+) 879 WP_019712967.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  F8M43_RS00245 abrB 44361..44651 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31219.06 Da        Isoelectric Point: 4.7658

>NTDB_id=343140 F8M43_RS00220 WP_003243571.1 41170..41997(+) (yaaT) [Bacillus subtilis strain ms-2]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADDRDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=343140 F8M43_RS00220 WP_003243571.1 41170..41997(+) (yaaT) [Bacillus subtilis strain ms-2]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCAGACGATCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P37541

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

100

100

1