Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   EU512_RS12790 Genome accession   NZ_CP035541
Coordinates   2535905..2536579 (-) Length   224 a.a.
NCBI ID   WP_000866106.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain PK-01     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2530905..2541579
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EU512_RS12755 (EU512_12765) - 2531115..2531558 (-) 444 Protein_2504 GNAT family N-acetyltransferase -
  EU512_RS12760 (EU512_12770) - 2531555..2532190 (-) 636 Protein_2505 aminoglycoside 6-adenylyltransferase -
  EU512_RS12765 (EU512_12775) - 2532331..2533005 (-) 675 WP_001105960.1 IS6 family transposase -
  EU512_RS12770 (EU512_12780) - 2533062..2533238 (-) 177 Protein_2507 undecaprenyl-diphosphate phosphatase -
  EU512_RS12775 (EU512_12785) - 2533252..2533989 (-) 738 WP_000369394.1 ABC transporter permease -
  EU512_RS12780 (EU512_12790) - 2533982..2534911 (-) 930 WP_000793446.1 ABC transporter ATP-binding protein -
  EU512_RS12785 (EU512_12795) - 2535027..2535908 (-) 882 Protein_2510 sensor histidine kinase -
  EU512_RS12790 (EU512_12800) braR 2535905..2536579 (-) 675 WP_000866106.1 response regulator transcription factor Regulator
  EU512_RS12795 (EU512_12805) - 2536665..2537339 (-) 675 WP_001105960.1 IS6 family transposase -
  EU512_RS12800 (EU512_12810) - 2537531..2537602 (-) 72 Protein_2513 IS6 family transposase -
  EU512_RS12805 (EU512_12815) - 2537634..2538506 (+) 873 WP_302643315.1 NAD(P)/FAD-dependent oxidoreductase -
  EU512_RS12810 (EU512_12820) merR 2538806..2539213 (+) 408 WP_002380758.1 Hg(II)-responsive transcriptional regulator MerR -
  EU512_RS12815 (EU512_12825) - 2539230..2539583 (+) 354 WP_000746201.1 TlpA disulfide reductase family protein -
  EU512_RS12820 (EU512_12830) - 2539580..2540259 (+) 680 Protein_2517 cytochrome c biogenesis CcdA family protein -
  EU512_RS12825 (EU512_12835) - 2540394..2540732 (+) 339 WP_000968575.1 hypothetical protein -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 25839.93 Da        Isoelectric Point: 4.9884

>NTDB_id=343099 EU512_RS12790 WP_000866106.1 2535905..2536579(-) (braR) [Staphylococcus haemolyticus strain PK-01]
MKVLIVEDDLVIGKMLAEELKKWQLEPILIEGFNHVMDAFNTNAPELVLLDINLPAFNGYHWCQEIRKVSTVPIIFISSR
NDSMDQVMAMQMGADDFIEKPFNMTVTITKIQALLRRTYDFTTQVNNLTVDDCELLLDAAKLKFNEETIDLTHTELQIMH
SLFQNKGKFVSRNALIEKCWESEHFIDDNTLAVNITRLRKKLQKLGLTDFIETKKNVGYRVGDV

Nucleotide


Download         Length: 675 bp        

>NTDB_id=343099 EU512_RS12790 WP_000866106.1 2535905..2536579(-) (braR) [Staphylococcus haemolyticus strain PK-01]
ATGAAAGTATTAATCGTAGAGGATGACTTAGTTATCGGGAAGATGCTTGCTGAAGAGCTCAAGAAGTGGCAGCTAGAACC
GATCTTAATAGAAGGTTTCAATCATGTAATGGATGCCTTCAACACGAATGCACCGGAACTTGTGTTACTCGATATTAATT
TACCTGCCTTCAATGGTTATCACTGGTGTCAGGAGATTCGTAAAGTTTCTACTGTACCGATTATATTTATTAGTTCGCGT
AACGACAGTATGGATCAAGTAATGGCGATGCAGATGGGTGCGGATGATTTCATTGAGAAGCCATTTAATATGACTGTTAC
AATTACTAAGATTCAAGCACTATTACGCCGCACGTATGATTTCACCACTCAAGTTAATAATTTAACAGTAGATGATTGCG
AGTTACTACTTGATGCAGCAAAGCTTAAATTTAATGAAGAAACCATAGACCTGACACACACTGAATTGCAAATCATGCAT
AGCTTATTCCAGAACAAGGGCAAATTCGTCAGTCGTAATGCGTTAATCGAAAAATGCTGGGAATCAGAACACTTCATTGA
TGACAATACGCTTGCTGTCAACATTACACGTTTACGCAAAAAGCTACAAAAACTAGGACTTACAGATTTTATCGAAACGA
AGAAAAATGTCGGATATCGTGTAGGTGACGTATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

66.516

98.661

0.656


Multiple sequence alignment