Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EU512_RS04545 | Genome accession | NZ_CP035541 |
| Coordinates | 930728..931126 (+) | Length | 132 a.a. |
| NCBI ID | WP_011275249.1 | Uniprot ID | A0A5B2YX53 |
| Organism | Staphylococcus haemolyticus strain PK-01 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 925728..936126
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EU512_RS04515 (EU512_04520) | atpD | 925875..927287 (+) | 1413 | WP_011275243.1 | F0F1 ATP synthase subunit beta | - |
| EU512_RS04520 (EU512_04525) | - | 927308..927709 (+) | 402 | WP_011275244.1 | F0F1 ATP synthase subunit epsilon | - |
| EU512_RS04525 (EU512_04530) | - | 927837..928070 (+) | 234 | WP_011275245.1 | DUF1146 family protein | - |
| EU512_RS04530 (EU512_04535) | murA | 928175..929440 (+) | 1266 | WP_033079610.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| EU512_RS04535 (EU512_04540) | fabZ | 929480..929917 (+) | 438 | WP_011275247.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| EU512_RS04540 (EU512_04545) | - | 930097..930540 (-) | 444 | WP_011275248.1 | YwpF-like family protein | - |
| EU512_RS04545 (EU512_04550) | ssb | 930728..931126 (+) | 399 | WP_011275249.1 | single-stranded DNA-binding protein | Machinery gene |
| EU512_RS04550 (EU512_04555) | - | 931465..932172 (+) | 708 | WP_011275250.1 | transglycosylase family protein | - |
| EU512_RS04555 (EU512_04560) | tenA | 932461..933150 (+) | 690 | WP_011275251.1 | thiaminase II | - |
| EU512_RS04560 (EU512_04565) | thiD | 933143..933964 (+) | 822 | WP_016931211.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| EU512_RS04565 (EU512_04570) | thiM | 933957..934748 (+) | 792 | WP_011275253.1 | hydroxyethylthiazole kinase | - |
| EU512_RS04570 (EU512_04575) | thiE | 934750..935388 (+) | 639 | WP_011275254.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 132 a.a. Molecular weight: 15141.05 Da Isoelectric Point: 4.7942
>NTDB_id=343074 EU512_RS04545 WP_011275249.1 930728..931126(+) (ssb) [Staphylococcus haemolyticus strain PK-01]
MLNKIVIVGRLTKKAQIFENEEVKIATFCVATERNYKDENNEIACDYIFCKAFGKTATNIESYTDQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSKNDNILPNTSYDEDAYSFDHLEVIDVN
MLNKIVIVGRLTKKAQIFENEEVKIATFCVATERNYKDENNEIACDYIFCKAFGKTATNIESYTDQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSKNDNILPNTSYDEDAYSFDHLEVIDVN
Nucleotide
Download Length: 399 bp
>NTDB_id=343074 EU512_RS04545 WP_011275249.1 930728..931126(+) (ssb) [Staphylococcus haemolyticus strain PK-01]
ATGCTAAATAAAATTGTGATAGTAGGTCGATTGACCAAAAAGGCACAAATATTTGAAAACGAGGAGGTGAAAATAGCTAC
GTTCTGTGTTGCAACTGAACGTAATTATAAAGATGAAAATAATGAAATAGCTTGTGATTATATTTTTTGTAAGGCATTTG
GTAAAACAGCAACAAATATAGAATCATATACAGACCAAGGCACTTTAGTTGGTATTACAGGACAAATGAGATCTCGTAAG
TACGATAAAGATGGCCAAACGCACTTTGTGACTGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATCTAAAAA
TGATAATATTCTTCCTAACACCTCATATGATGAAGACGCTTATTCCTTTGATCACCTTGAAGTGATTGATGTTAACTAA
ATGCTAAATAAAATTGTGATAGTAGGTCGATTGACCAAAAAGGCACAAATATTTGAAAACGAGGAGGTGAAAATAGCTAC
GTTCTGTGTTGCAACTGAACGTAATTATAAAGATGAAAATAATGAAATAGCTTGTGATTATATTTTTTGTAAGGCATTTG
GTAAAACAGCAACAAATATAGAATCATATACAGACCAAGGCACTTTAGTTGGTATTACAGGACAAATGAGATCTCGTAAG
TACGATAAAGATGGCCAAACGCACTTTGTGACTGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATCTAAAAA
TGATAATATTCTTCCTAACACCTCATATGATGAAGACGCTTATTCCTTTGATCACCTTGAAGTGATTGATGTTAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
75.573 |
99.242 |
0.75 |
| ssb | Staphylococcus aureus MW2 |
74.809 |
99.242 |
0.742 |