Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   FSA28_RS05020 Genome accession   NZ_CP044495
Coordinates   1024079..1024750 (+) Length   223 a.a.
NCBI ID   WP_002263237.1    Uniprot ID   Q8DUD1
Organism   Streptococcus mutans strain UA140     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1019079..1029750
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA28_RS05010 (FSA28_0774) - 1021280..1022032 (+) 753 WP_002265085.1 ABC transporter ATP-binding protein -
  FSA28_RS05015 (FSA28_0775) - 1022034..1024037 (+) 2004 WP_088741879.1 ABC transporter permease -
  FSA28_RS05020 (FSA28_0776) braR 1024079..1024750 (+) 672 WP_002263237.1 DNA-binding response regulator Regulator
  FSA28_RS05025 (FSA28_0777) - 1024747..1025700 (+) 954 WP_002263236.1 sensor histidine kinase -
  FSA28_RS05030 (FSA28_0778) citC 1025851..1026900 (-) 1050 WP_002292176.1 [citrate (pro-3S)-lyase] ligase -
  FSA28_RS05035 (FSA28_0779) citG 1027079..1027969 (-) 891 WP_002265082.1 triphosphoribosyl-dephospho-CoA synthase CitG -
  FSA28_RS05040 (FSA28_0780) - 1027975..1028664 (-) 690 WP_002269136.1 GntR family transcriptional regulator -

Sequence


Protein


Download         Length: 223 a.a.        Molecular weight: 25802.90 Da        Isoelectric Point: 5.1691

>NTDB_id=343017 FSA28_RS05020 WP_002263237.1 1024079..1024750(+) (braR) [Streptococcus mutans strain UA140]
MLKQEKIYLVEDDTTIVNLLKNHLGQHYQVKSVDNFRAILQEVKEFKPDLILMDITLPYFNGFYWTTEIRKSMTMPIIFI
SSADEEMNAVMAMNMGGDDFLSKPFSLPILDAKIAAFLRRANEFTKQGHQIEEFELTLDGVFSNLERQETIQLTPTETKI
LSLLIDYKGEVVTKEALLNRLWEGEEFIDQNTLSVNMTRLRKKVLSVSFDKIHTVRGVGYLIK

Nucleotide


Download         Length: 672 bp        

>NTDB_id=343017 FSA28_RS05020 WP_002263237.1 1024079..1024750(+) (braR) [Streptococcus mutans strain UA140]
ATGCTAAAGCAAGAAAAAATTTACTTGGTTGAAGATGATACAACCATTGTCAATCTTTTAAAGAATCATTTGGGACAACA
CTATCAAGTTAAAAGCGTTGATAACTTTAGGGCTATCTTGCAAGAAGTTAAAGAATTTAAACCCGATTTAATTCTGATGG
ATATTACTTTGCCCTATTTCAATGGCTTTTATTGGACTACTGAAATCAGAAAGAGCATGACCATGCCCATTATCTTTATT
TCCAGTGCTGATGAAGAAATGAATGCAGTAATGGCTATGAATATGGGAGGTGATGATTTTTTGAGCAAGCCTTTCTCGCT
GCCTATTTTGGATGCCAAAATCGCTGCTTTCTTGCGCCGTGCTAACGAGTTCACTAAGCAAGGCCATCAAATTGAAGAGT
TTGAATTAACGTTAGATGGTGTATTCTCAAATTTAGAAAGACAAGAGACTATCCAATTGACTCCAACAGAAACGAAAATT
CTTTCCTTACTTATTGATTATAAAGGAGAGGTTGTCACTAAGGAAGCTCTTCTCAACCGACTATGGGAGGGAGAGGAATT
TATTGATCAAAACACGCTTAGTGTCAATATGACACGTCTTCGTAAAAAGGTTCTATCAGTAAGTTTTGATAAGATTCATA
CAGTAAGAGGAGTAGGGTATTTAATTAAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q8DUD1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

43.498

100

0.435


Multiple sequence alignment