Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   FSA28_RS00210 Genome accession   NZ_CP044495
Coordinates   28738..29493 (+) Length   251 a.a.
NCBI ID   WP_002263137.1    Uniprot ID   Q8DWM0
Organism   Streptococcus mutans strain UA140     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 23738..34493
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA28_RS00190 (FSA28_1864) mreD 24480..24986 (+) 507 WP_002263141.1 rod shape-determining protein MreD -
  FSA28_RS00195 (FSA28_1865) - 25096..26391 (+) 1296 WP_002290808.1 glucan-binding protein GbpB -
  FSA28_RS00200 (FSA28_1866) - 26516..27484 (+) 969 WP_002263139.1 ribose-phosphate diphosphokinase -
  FSA28_RS00205 (FSA28_1867) - 27573..28748 (+) 1176 WP_002290809.1 pyridoxal phosphate-dependent aminotransferase -
  FSA28_RS00210 (FSA28_1868) recO 28738..29493 (+) 756 WP_002263137.1 DNA repair protein RecO Machinery gene
  FSA28_RS00215 (FSA28_1869) plsX 29701..30699 (+) 999 WP_002269788.1 phosphate acyltransferase PlsX -
  FSA28_RS00220 (FSA28_1870) - 30701..30949 (+) 249 WP_002263135.1 acyl carrier protein -
  FSA28_RS00225 (FSA28_1871) - 31129..31758 (+) 630 Protein_22 ATP-binding cassette domain-containing protein -
  FSA28_RS00230 (FSA28_1872) purC 31880..32587 (+) 708 WP_002267902.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -

Sequence

Protein


Download         Length: 251 a.a.        Molecular weight: 29353.88 Da        Isoelectric Point: 6.6577

>NTDB_id=342972 FSA28_RS00210 WP_002263137.1 28738..29493(+) (recO) [Streptococcus mutans strain UA140]
MQTKETRGLVLYNRPFREDDKLVKIFTETSGKHMFFVRHATNSKLSSVIQPLILANFILKINNHGLSYIEDYKGVSLFKE
INADIYKLAYATYLVSLADAAISDAVYDAPLFAFLIKTLELMDEGLDYEILTNIFEIQILDRFGVQLNFHDCVFCHRVGL
AFDFSHRYSGLLCPEHYEKDLYRSHLDPNVPYLLNQFQTLHFDSLKTISVKPDMKQKLRKFIDEVYEDYIGLRLKSKKFI
DDLDHWGQVMK

Nucleotide


Download         Length: 756 bp        

>NTDB_id=342972 FSA28_RS00210 WP_002263137.1 28738..29493(+) (recO) [Streptococcus mutans strain UA140]
ATGCAGACTAAAGAAACAAGAGGTTTAGTGCTTTATAATCGGCCATTTAGAGAGGATGATAAGCTGGTTAAAATTTTTAC
GGAAACTTCCGGCAAACACATGTTTTTTGTGCGTCATGCTACTAATTCAAAATTGTCTTCTGTCATTCAACCATTGATTC
TAGCTAATTTTATTTTAAAAATTAATAATCATGGACTTTCTTATATTGAAGATTATAAGGGAGTCTCTCTTTTTAAGGAA
ATTAATGCAGATATTTATAAATTAGCTTATGCTACTTACCTTGTGTCTTTGGCTGATGCTGCTATTTCAGATGCTGTCTA
TGATGCCCCTCTTTTTGCTTTTTTAATTAAGACCCTGGAATTGATGGATGAAGGTCTCGATTATGAAATTTTGACCAATA
TTTTTGAAATTCAAATTCTAGATCGCTTTGGCGTTCAACTTAATTTTCATGACTGTGTTTTTTGCCATCGTGTCGGTTTA
GCTTTTGATTTTTCACATCGCTATTCAGGTCTTTTGTGTCCTGAACATTATGAAAAAGATCTTTATCGTAGTCACTTAGA
TCCTAATGTCCCTTACCTTTTGAACCAATTTCAAACTTTACATTTTGATAGCTTAAAAACCATTTCAGTTAAACCTGACA
TGAAACAAAAGCTGAGAAAATTTATTGATGAAGTTTATGAGGACTATATTGGTCTTCGTCTCAAAAGTAAAAAATTTATT
GATGATTTAGATCATTGGGGACAAGTTATGAAATAA

Domains

Predicted by InterProScan.

Recombination protein O C terminal (RecO_C)

(84-237)

Recombination protein O N terminal (RecO_N)

(1-77)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DWM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

65.339

100

0.653

Multiple sequence alignment