Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   EU243_RS02625 Genome accession   NZ_CP035533
Coordinates   532467..532865 (+) Length   132 a.a.
NCBI ID   WP_043866822.1    Uniprot ID   -
Organism   Bacillus velezensis strain DTU001     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 527467..537865
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EU243_RS02605 (EU243_02620) - 529866..530228 (-) 363 WP_014304320.1 winged helix-turn-helix transcriptional regulator -
  EU243_RS02610 (EU243_02625) hxlA 530460..531095 (+) 636 WP_014304319.1 3-hexulose-6-phosphate synthase -
  EU243_RS02615 (EU243_02630) hxlB 531092..531649 (+) 558 WP_014304318.1 6-phospho-3-hexuloisomerase -
  EU243_RS02620 (EU243_02635) nucA/comI 532008..532445 (+) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  EU243_RS02625 (EU243_02640) nin/comJ 532467..532865 (+) 399 WP_043866822.1 competence protein ComJ Regulator
  EU243_RS02630 (EU243_02645) - 532906..533124 (-) 219 Protein_512 family 1 glycosylhydrolase -
  EU243_RS19700 (EU243_02650) - 533156..533401 (-) 246 WP_109567708.1 family 1 glycosylhydrolase -
  EU243_RS02640 (EU243_02655) - 533343..533618 (-) 276 WP_369719109.1 YckD family protein -
  EU243_RS02645 (EU243_02660) - 533735..534169 (-) 435 WP_021494203.1 RDD family protein -
  EU243_RS02650 (EU243_02665) - 534184..535320 (-) 1137 WP_048368274.1 zinc-dependent alcohol dehydrogenase -
  EU243_RS02655 (EU243_02670) - 535385..536587 (-) 1203 WP_025853783.1 GTP-binding protein -
  EU243_RS19410 (EU243_02675) - 536740..536865 (+) 126 Protein_518 hypothetical protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 15014.99 Da        Isoelectric Point: 4.6564

>NTDB_id=342968 EU243_RS02625 WP_043866822.1 532467..532865(+) (nin/comJ) [Bacillus velezensis strain DTU001]
MNKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVLSYEKKATVPF
EAVKDGIEIESVMSKRLFFNIPKGRYSLTCYSVPAEISDLHADTYIIDADAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=342968 EU243_RS02625 WP_043866822.1 532467..532865(+) (nin/comJ) [Bacillus velezensis strain DTU001]
TTGAATAAATCATGGAAACCGCAAGAACTGGCCATTTCGTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTCGAAGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACTATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTCTTTAATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGACGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

76.744

97.727

0.75

Multiple sequence alignment