Detailed information    

insolico Bioinformatically predicted

Overview


Name   xerS   Type   Machinery gene
Locus tag   FSA31_RS04790 Genome accession   NZ_CP044492
Coordinates   983294..984364 (-) Length   356 a.a.
NCBI ID   WP_002262304.1    Uniprot ID   O69155
Organism   Streptococcus mutans strain T8     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 978294..989364
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA31_RS04765 (FSA31_0944) citE 978442..979344 (+) 903 WP_002263226.1 citrate (pro-3S)-lyase subunit beta -
  FSA31_RS04770 (FSA31_0945) citF 979331..980866 (+) 1536 WP_002267376.1 citrate lyase subunit alpha -
  FSA31_RS04775 (FSA31_0946) citX 980859..981395 (+) 537 WP_002284661.1 citrate lyase holo-[acyl-carrier protein] synthase -
  FSA31_RS04780 (FSA31_0947) - 981408..982799 (+) 1392 WP_002265077.1 oxaloacetate decarboxylase subunit alpha -
  FSA31_RS04785 - 982867..983004 (-) 138 Protein_889 IS3 family transposase -
  FSA31_RS04790 (FSA31_0948) xerS 983294..984364 (-) 1071 WP_002262304.1 tyrosine recombinase XerS Machinery gene
  FSA31_RS04795 (FSA31_0949) - 984522..985403 (+) 882 WP_002284692.1 ABC transporter ATP-binding protein -
  FSA31_RS04800 - 985424..986018 (+) 595 Protein_892 ABC transporter permease -
  FSA31_RS04805 (FSA31_0951) - 986018..986518 (-) 501 Protein_893 histidine kinase dimerization/phospho-acceptor domain-containing protein -
  FSA31_RS04810 (FSA31_0952) - 986518..987210 (-) 693 WP_002271550.1 response regulator transcription factor -
  FSA31_RS04815 (FSA31_0953) - 987343..988176 (-) 834 WP_002284688.1 glycosyltransferase family 8 protein -
  FSA31_RS04820 (FSA31_0954) - 988192..988947 (-) 756 WP_002262298.1 SDR family oxidoreductase -

Sequence


Protein


Download         Length: 356 a.a.        Molecular weight: 41591.94 Da        Isoelectric Point: 9.7846

>NTDB_id=342793 FSA31_RS04790 WP_002262304.1 983294..984364(-) (xerS) [Streptococcus mutans strain T8]
MRRELLLEKIDELKELMPWYVLEYYQSKLTVPYSFTTLYEYLKEYRRFFEWLIDSGVSNANKLADIPLETLEHLSKKDME
SFILYLRERTLLNTKNKRQGVSQTTINRTLSALSSLYKYLTEEVENADGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGNETMEFLEYVDCEYEHKLSKRALSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMIIEVTRKGGKHDS
VNVAGFAKPYLENYITIRRGRYKAKKTDLAFFLSEYRGVPNRMDASSIEKMVAKYSQDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDKL

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=342793 FSA31_RS04790 WP_002262304.1 983294..984364(-) (xerS) [Streptococcus mutans strain T8]
ATGAGACGTGAACTCTTACTTGAAAAAATTGACGAACTTAAGGAACTTATGCCTTGGTATGTGCTAGAGTATTATCAATC
TAAATTGACAGTTCCTTATAGTTTTACGACCTTATACGAATATTTAAAAGAATATCGGCGTTTCTTTGAATGGTTAATTG
ATTCTGGTGTCTCTAATGCGAATAAACTTGCTGATATTCCGCTGGAAACTTTGGAGCATCTTAGTAAAAAAGATATGGAA
TCCTTTATTCTTTATTTACGAGAACGAACTCTTTTAAACACTAAAAACAAACGTCAAGGTGTTTCTCAGACAACGATAAA
CCGCACACTTTCAGCCTTATCAAGCCTTTATAAATACTTGACTGAGGAAGTTGAAAATGCTGATGGTGAACCTTATTTTT
ATCGAAATGTCATGAAAAAGGTATCAACTAAAAAGAAAAAGGAAACATTGGCCGCACGAGCTGAGAATATTAAACAAAAG
CTCTTTTTAGGCAATGAAACAATGGAATTTTTAGAATATGTGGATTGTGAATATGAACACAAACTTTCTAAACGCGCTCT
TTCCTCTTTTCGAAAAAATAAAGAAAGAGATTTGGCAATTATTGCTTTGCTGCTAGCATCTGGAGTTCGTCTTTCAGAGG
CTGTTAACCTTGATCTTAAGGATGTTAATCTCAATATGATGATTATTGAAGTTACCCGTAAGGGCGGCAAACACGATTCG
GTTAATGTCGCTGGTTTCGCTAAACCTTATTTAGAAAACTACATTACTATCAGACGGGGGCGCTACAAGGCTAAAAAGAC
TGATCTAGCTTTCTTTTTATCCGAATATCGTGGTGTTCCTAATCGCATGGATGCTTCTTCTATTGAAAAAATGGTTGCTA
AATATTCGCAAGATTTCAAAATCCGCGTCACTCCCCACAAACTAAGACACACGCTTGCAACTAGATTATACGATGCTACC
AAATCACAAGTTTTGGTCAGTCATCAATTAGGTCATGCTTCTACTCAAGTAACAGACCTTTATACTCATATCGTTAATGA
TGAACAAAAAAATGCTTTAGATAAATTATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB O69155

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  xerS Streptococcus pneumoniae R6

82.865

100

0.829