Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   FSA31_RS00530 Genome accession   NZ_CP044492
Coordinates   95413..95889 (-) Length   158 a.a.
NCBI ID   WP_002284820.1    Uniprot ID   -
Organism   Streptococcus mutans strain T8     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 90413..100889
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA31_RS00510 (FSA31_0098) tig 91446..92729 (+) 1284 WP_002284816.1 trigger factor -
  FSA31_RS00515 (FSA31_0099) - 92940..93650 (-) 711 WP_002284817.1 class I SAM-dependent methyltransferase -
  FSA31_RS00520 (FSA31_0100) - 93628..94308 (-) 681 WP_002284818.1 methyltransferase domain-containing protein -
  FSA31_RS00525 (FSA31_0101) gap 94375..95388 (-) 1014 WP_002284819.1 type I glyceraldehyde-3-phosphate dehydrogenase -
  FSA31_RS00530 (FSA31_0102) luxS 95413..95889 (-) 477 WP_002284820.1 S-ribosylhomocysteine lyase Regulator
  FSA31_RS00535 (FSA31_0103) - 95890..96813 (-) 924 WP_002284821.1 EamA family transporter -
  FSA31_RS00540 (FSA31_0104) - 96940..97413 (+) 474 WP_024783168.1 Rrf2 family transcriptional regulator -
  FSA31_RS00545 (FSA31_0105) - 97457..98578 (+) 1122 WP_226706245.1 MFS transporter -
  FSA31_RS00550 (FSA31_0106) - 98962..99210 (+) 249 WP_002284978.1 hypothetical protein -
  FSA31_RS00555 (FSA31_0107) - 99278..99826 (+) 549 WP_002284977.1 hypothetical protein -
  FSA31_RS00560 - 99986..100585 (+) 600 Protein_84 replication protein -
  FSA31_RS00565 (FSA31_0110) - 100572..100818 (+) 247 Protein_85 MerR family transcriptional regulator -

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 17885.26 Da        Isoelectric Point: 6.6044

>NTDB_id=342749 FSA31_RS00530 WP_002284820.1 95413..95889(-) (luxS) [Streptococcus mutans strain T8]
MAKVESFELDHTKVHAPYVRKIDTQVGEKGDSISNFDVRLVQPNQSAIPSGGIHTIEHSLASLIRDRIDGVIDFSPFGCR
TGFHLIIWGNHTSEEIALVIKESLKEIVSDEFRWENVPGISERQCGNYRDHSLFTAKEWGKQILRQGISSDPFLRKIV

Nucleotide


Download         Length: 477 bp        

>NTDB_id=342749 FSA31_RS00530 WP_002284820.1 95413..95889(-) (luxS) [Streptococcus mutans strain T8]
ATGGCAAAAGTAGAAAGTTTCGAATTAGATCACACTAAAGTTCATGCTCCGTATGTTCGCAAAATTGATACACAAGTTGG
AGAGAAAGGAGATTCTATTAGTAATTTTGATGTAAGACTTGTTCAACCTAATCAAAGTGCTATTCCGAGCGGAGGAATTC
ATACTATTGAACACTCTCTTGCCAGTCTTATTAGAGATCGTATCGATGGAGTAATAGATTTTTCTCCATTCGGATGTCGA
ACAGGGTTTCATCTTATTATTTGGGGAAATCACACATCAGAAGAGATTGCTTTAGTGATAAAAGAATCTCTAAAAGAAAT
AGTAAGTGATGAATTTCGTTGGGAAAATGTCCCTGGTATTTCAGAAAGACAATGTGGTAATTATAGAGACCATTCACTTT
TTACAGCAAAGGAATGGGGAAAACAAATTTTGAGACAGGGGATATCAAGTGATCCATTTTTACGTAAAATTGTATAG

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(3-149)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

37.908

96.835

0.367